| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1512 |
|---|
| Symbol | |
|---|
| ID | 4281871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1732221 |
|---|
| End bp | 1734863 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638138392 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_754186 |
|---|
| Protein GI | 114567032 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAGA AATATGTCTA TTTATTTGAA GAAGGTAATT CTAACATGCG ACAGTTATTG
GGCGGCAAAG GCGCTAACCT GGCTGAAATG ACCTTGATTG GGCTGCCGGT TCCTGCTGGC
TTTACCATAA CAACTGAAGC CTGTAATGAA TACCTGACTG CGGGTCATAA ATTTCCTGAT
GGTGTCCTGG AACAAGTCTT TACAGCTTTA GAAAGATTAG AATTGGATAG TGGCAAATCT
TTTGGGAAAA AAAATAACCC TTTACTGGTT TCAGTAAGAT CAGGGGCGGC GGTATCCATG
CCTGGAATGA TGGATACCAT TCTCAACCTG GGTTTGAATG ATGAGTCAGT TCAGGGTTTG
GCCAGCTTAA CCGGGGACAG TCGTTTTGCT TATGATTGTT ACCGGCGTTT TATCCAGATG
TTCAGTGATG TGGTTCTGGG AGTGGAACAT GCCAGGTTTG ATGAAGTGAT GGAAAGATAC
AAAAGGAAAC TGGCGCTTAT TTTTGACTAT GAAATTCCTT CCAGTGAACT ACAAAGCATT
ATTGAAGAAT ACAAGGAAAT AGTTGAGCAG GAAAAGGGAT TTGCCTTTCC TCAAGATGTA
CGGGAGCAAT TAACCATGGC CATTCAGGCA GTATTTGATT CCTGGAACAA CCAGAGGGCT
ATAGTATACC GGCGCTTAAA CAAAATTGAC GATGAACTGG GAACCGCAGT AAATGTGCAG
TGCATGGCCT TTGGCAATAT GGGATTGGAT TGCGGAACCG GTGTAGCTTT CACCCGTAAC
CCCTCCACCG GGGAGCGGGA ACTATATGGT GAGTTCCTGG TTAATGCTCA AGGTGAAGAT
GTGGTAGCGG GTATAAGAAC TCCTACCCCC ATTGACCGTC TAAAGGAAGA ATTACCTGGG
GTTTTCCAGC AGTTTTTGGA CACCTGCCAA AAGCTGGAGA CACATTATCG CGATATGCAA
GACATTGAGT TTACCGTGGA AAAGGGTAAA CTATACATGC TGCAAACCAG AAGCGGAAAA
CGTACGGCCC GGGCTTCCGT AAGGATAGCC GTAGAAATGG TAAACGAAGG CCTGATCACG
GTGGAAGAAG CCCTGTTGAG AGTTGATGCC GAGCAAATCA ACCAGTTGTT GCACCGGCAG
ATTGACCAGA GTGTAAAATT AGATGCTATC GCCAAAGGGC TGCCTGCTTC ACCGGGTGCC
GCTTGTGGTA AAGTTCTCTT TGATGCGGAC CTGGCGGAGA AAATGGGGGG AGCGGGCGAA
AAGGTCGTTT TGGTTAGAAG TGAGACCACA CCAGATGATA TTCATGGAAT CATATATGCT
CAGGGAGTCC TTACCGCGCG AGGAGGAATG ACTTCTCATG CTGCAGTAGT AGCCCGGGGA
ATGGGTAAAC CCTGTGTTTG TGGTTGTGAA GCTATAAAGA TTGATAGCGG AAACCGGCAA
TTTATAGTTA ATGGGATAGT AGTTAAAGAA GGGGATGTAA TTACCATCGA TGGGGCTAGC
GGCAATGTAA TGCTGGGTGA AGTGCCCATG ATAGAACCTA CCCTTTCTGA TGAATTTGCT
CTACTGCTGC AATGGGCCAA TCAAATAAAG AAATTGGCCA TAAGGGCTAA TGCCGATACC
CCTCAAGATG CAGCCCGAGC CCGCGAATTT GGAGCTGAAG GAATAGGCCT CTGCCGCACT
GAACATATGT TTATGGCAGC GGAACGGCTC CCCATTGTTC AACAGATGAT ACTGGCTGAG
AACCTGGAAG ATAGAGAAGA GGCCCTGAGC CAACTTTTAC CCTTCCAGCG AGATGATTTC
TATGGAATTT TAAAAGCTAT GGCTCCGCAC CCGGTTACTA TTCGTCTTTT AGACCCTCCG
TTGCATGAGT TTCTTCCTCA TCCGGAAACC CTCTTGTTGG AGATAGCAGA GATGAAACAC
CAGCAGATAA AAGGTAAAGT ACTGCTGGAA AAGGAAGAAT TGCTAAAGAA AGTACATAGC
CTGTCCGAGG CCAACCCCAT GCTGGGACAC CGGGGATGTA GACTGGGGCT TACCTATCCC
GAGATTTACT GCATGCAGGC CCGGGCTATT TTTGAGGCTA TGGTACAGCT GCAAAAAGAG
GGGATAGACT GCTTTACTGA AGTCGAGATA CCTCTGGTAA TGGATATTGC CGAGCTATCC
CTATTAAAAG CAGAAATAAT GGGTGTCTAT GAGCAGGTGA AAAAGGAAAA CAACTGTGAA
CTGGACTTTA CGGTGGGGAC CATGCTGGAG CTTCCCCGGG CTTGCATTAT GGCGGATGAA
ATAGCCCGTG AAGCCGAGTT CTTCTCTTTT GGTACCAATG ACCTGACCCA GACAACTTTT
GGCTTTAGCC GCGATGATGC TGAAGGCAAA TTCATTCCCA TATATCTGGA GAAAAAGATT
ATCAAGGACA ATCCTTTTGC AGTGTTGGAT CGTAAGGGTG TGGGAAGTCT AATGCGCCTG
GCGGTGGAAA AGGCCCGCAG CGTAAAGAAA GATATACTAA TGGGCATCTG TGGTGAACAC
GGAGGCGAAC CCAGCTCTAT CGAGTTTTGT CATATAGTAG GATTGGATTA TGTGAGCTGT
TCGCCTTATC GAATACCAGT AGCTCGTCTG GCAGCCGCCC AGGCCAGCTT GCTGAATAAT
TAG
|
|---|
| Protein sequence | MSKKYVYLFE EGNSNMRQLL GGKGANLAEM TLIGLPVPAG FTITTEACNE YLTAGHKFPD
GVLEQVFTAL ERLELDSGKS FGKKNNPLLV SVRSGAAVSM PGMMDTILNL GLNDESVQGL
ASLTGDSRFA YDCYRRFIQM FSDVVLGVEH ARFDEVMERY KRKLALIFDY EIPSSELQSI
IEEYKEIVEQ EKGFAFPQDV REQLTMAIQA VFDSWNNQRA IVYRRLNKID DELGTAVNVQ
CMAFGNMGLD CGTGVAFTRN PSTGERELYG EFLVNAQGED VVAGIRTPTP IDRLKEELPG
VFQQFLDTCQ KLETHYRDMQ DIEFTVEKGK LYMLQTRSGK RTARASVRIA VEMVNEGLIT
VEEALLRVDA EQINQLLHRQ IDQSVKLDAI AKGLPASPGA ACGKVLFDAD LAEKMGGAGE
KVVLVRSETT PDDIHGIIYA QGVLTARGGM TSHAAVVARG MGKPCVCGCE AIKIDSGNRQ
FIVNGIVVKE GDVITIDGAS GNVMLGEVPM IEPTLSDEFA LLLQWANQIK KLAIRANADT
PQDAARAREF GAEGIGLCRT EHMFMAAERL PIVQQMILAE NLEDREEALS QLLPFQRDDF
YGILKAMAPH PVTIRLLDPP LHEFLPHPET LLLEIAEMKH QQIKGKVLLE KEELLKKVHS
LSEANPMLGH RGCRLGLTYP EIYCMQARAI FEAMVQLQKE GIDCFTEVEI PLVMDIAELS
LLKAEIMGVY EQVKKENNCE LDFTVGTMLE LPRACIMADE IAREAEFFSF GTNDLTQTTF
GFSRDDAEGK FIPIYLEKKI IKDNPFAVLD RKGVGSLMRL AVEKARSVKK DILMGICGEH
GGEPSSIEFC HIVGLDYVSC SPYRIPVARL AAAQASLLNN
|
|---|
| |