Gene Swol_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1295 
Symbol 
ID4281730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1496132 
End bp1496545 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID638138169 
Productrrf2 family protein 
Protein accessionYP_753974 
Protein GI114566820 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCA CACGCCAGAC CGAATATGCT ATTAAGATAT TAATTGAACT TGCTAAATCT 
CCTTTTGGAG AATTGATACC CAGCAAGCTT ATTGCCGAGC AACAGGATAT ACCCGGCATG
TTTTTGCAAA AGACGGTGCA ACTTTTATCA CGGGCTGGAT TAGTCAGTAC GCAACGGGGT
ATTCAAGGGG GGGTGAGGCT AACAGTATCT GCAGACAAAA TTACTATTGC TAATGTGATA
ACTGCAATTG AAGGACCTCT AGCTTTAAAT CTTTGTTTAT CGCCGGGTTA TTCTTGTCCT
AATATGACAG ATTGCCAGGT GAGACATATT TTGGGGCGAG CCCAGGCGGC TTTGTTGCAC
GAATTACAGC AGGAAAGTAT AGCGGATATA GTAGAAGGGA AACTGGCCAA GTGA
 
Protein sequence
MQITRQTEYA IKILIELAKS PFGELIPSKL IAEQQDIPGM FLQKTVQLLS RAGLVSTQRG 
IQGGVRLTVS ADKITIANVI TAIEGPLALN LCLSPGYSCP NMTDCQVRHI LGRAQAALLH
ELQQESIADI VEGKLAK