| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1221 |
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| Symbol | |
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| ID | 4282486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1411752 |
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| End bp | 1412432 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638138096 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_753901 |
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| Protein GI | 114566747 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.464139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGGAATG CCAGGCAGGA GGTAAGTTCC ATTTTTACAG GACTTATTGA AGAAATAGGA
AGCATAAAAC AGATTATACG AGGAAAACGC TCTATACAGC TCCGGATCGA GGCAGAGAAA
GTTTTGTCCG ATGTTAAAAT TGGCGACAGT ATTGCTGTTA ACGGGGTTTG CCTTACGGTT
ACGGATTTTA CCAAAACTGA TTTTACCTGT GATCTCATGC CCGAGACTAT GGATAAGAGC
AGTTTAAAAT TCCTGCAAAG TGCAAGTCCG GTAAATCTGG AAAGAGCTTT ACAGCTCAGC
GACCGCCTGG GTGGTCACCT GGTACAAGGA CATGTTGATG CGCTAGGCAG AATAAAACAG
AAAGAGCAAT TGGACATAGC AATAATCTTT CGTATCGAGG CCCCGTCCAG TGTTTTAAAA
TATACGGTTC CCAAAGGTTC AATTGCCATT GATGGCATTA GCCTAACCGT AATAGATGTT
TTCCCGGATA GTTTTACCGT CTCTTTAATT CCCCACAGCG CCCAAAATAC TACCTTGGCG
CAAAAAAACA TAGGGGATAT GGTTAACCTG GAGAGTGATA TTATTGGGCG TTATGTAGAG
AAATTGATGT GTTCAGAAAA AAATGAAAGG GAATCATCTC GCCTTAGTAT AAGCTTTTTG
GCCGAAAATG GTTTTGTATA A
|
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| Protein sequence | MRNARQEVSS IFTGLIEEIG SIKQIIRGKR SIQLRIEAEK VLSDVKIGDS IAVNGVCLTV
TDFTKTDFTC DLMPETMDKS SLKFLQSASP VNLERALQLS DRLGGHLVQG HVDALGRIKQ
KEQLDIAIIF RIEAPSSVLK YTVPKGSIAI DGISLTVIDV FPDSFTVSLI PHSAQNTTLA
QKNIGDMVNL ESDIIGRYVE KLMCSEKNER ESSRLSISFL AENGFV
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