Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1210 |
Symbol | |
ID | 4282621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1400290 |
End bp | 1401003 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138084 |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_753890 |
Protein GI | 114566736 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0491626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCTTTA TACAGTGGCT AAAGGAAGAA CAACCGGATG TTCTCTGTCT GCAAGAGACC AAAGCCCATC CCGAACAATT GGAAGAATCT CTGGTAAACA TAAAAGGTTA TCAAAGTTGC TGGAATTCGG GGGAGAGAAG GGGTTATAGC GGGGTAGCCT GCTATTTTCA AAAAGAACCC CTGCAGGTGG AGAAAAACCT GGGGGTTGAA GAATTTGACC GCGAGGGCCG GGTATTAATC AGCTTCCATG AGAATCTGGT TCTATTAAAT GTCTATTTCC CCAATGGGCA GATGGGAGAA GAACGGCTAG CATATAAACT GCGCTTTTAC GAGTATTTGA TAAACTTTTG CGAGGAACTA AAAAAACGTT ATCCTCGCCT GGTAATCTGT GGTGACTTTA ACACGGCTCA CCGGGAAATT GACCTGAAAA ACCCCAAAGC CAATGAAGGT CGTTCCGGCT TTTTGCCGAT AGAAAGGGAA ATGCTGGATA GGTTTTTATC CTATGGCTAT GTGGATGCTT TCCGTTATCT CTATCCGGAA AAGGTTCAGT ATTCCTGGTG GAGTTACCGT ACCAGGGCCC GGGAACGGAA TGCAGGTTGG AGGATTGATT GTTTTTATGT TAGCGAAAAG CTGCTTGATG ATATTATAGA CTGTGAGGTT TTGGATCATA TACCGGGCTC CGACCATTGC CCCATAGCTC TGTATTTAAA GTAA
|
Protein sequence | MGFIQWLKEE QPDVLCLQET KAHPEQLEES LVNIKGYQSC WNSGERRGYS GVACYFQKEP LQVEKNLGVE EFDREGRVLI SFHENLVLLN VYFPNGQMGE ERLAYKLRFY EYLINFCEEL KKRYPRLVIC GDFNTAHREI DLKNPKANEG RSGFLPIERE MLDRFLSYGY VDAFRYLYPE KVQYSWWSYR TRARERNAGW RIDCFYVSEK LLDDIIDCEV LDHIPGSDHC PIALYLK
|
| |