Gene Swol_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1186 
Symbol 
ID4282664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1372611 
End bp1373387 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID638138059 
Producthypothetical protein 
Protein accessionYP_753866 
Protein GI114566712 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0460603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG CTGTTTTAAT ACTGATAGCT ATGATGGTGT TACAATTATT CACAGCTCCA 
GCAATTGCCG CTATGGACTT GCCCCAGCCT GACCGCAATT TCTACTGTCT CGATCAGGCC
GATATGCTTA GCGAGGAAAG CGAGAACGCC ATTATAAATA CCAGTAAGAA CCTGCAGCAA
AAGACCTCTG CCCAAATCGT AGTGGTTACG GTGCCTACTA TCGGGGAAGA TCTAGTCCTG
GAGGATTATT CCCTGGAGCT TTTTCGCCAA TGGGGTATAG GAGATAAAGA GAAGAATAAT
GGAGTTTTAC TGCTAATCGC TCAGAAAGAG CGAAAAAGCC GTATTGAAGT TGGCTATGGT
CTGGAGGGTG TACTGCCTGA CGGAAAAACT GGCCGGATTC AGGATGAAAA CCTGATACCG
TATTTTAAAA ATGGGCAATA TGATGCGGGA ATTATTAATA CTTATAATGC TTTATTAAAG
GAAGTATCAC AAGAATATGA TATCCCCTAC CAGCCTGCTT CTGGTGGCCA GAAACCTTCT
CCCCAGAAGG ATGAAAATGA AATATCCTGG CCTGCTATCA TTTTCATACT TATAATCCTG
TATATCATCT ACCGTAAAAC GCGCGGCCGA GGTTCTTCAG GCAGAGGGCC CGGCGGCAGT
GGCGGAGGGG GATATTTCGG TGGGGGCGGT TATTCTGGAG GCGGAGGTTT TGGCGGCGGC
GGTAGCTTCG GGGGAGGCGG CTCAGCCGGC GGCGGCGGGA GTAGCCGTGG CTGGTAA
 
Protein sequence
MRKAVLILIA MMVLQLFTAP AIAAMDLPQP DRNFYCLDQA DMLSEESENA IINTSKNLQQ 
KTSAQIVVVT VPTIGEDLVL EDYSLELFRQ WGIGDKEKNN GVLLLIAQKE RKSRIEVGYG
LEGVLPDGKT GRIQDENLIP YFKNGQYDAG IINTYNALLK EVSQEYDIPY QPASGGQKPS
PQKDENEISW PAIIFILIIL YIIYRKTRGR GSSGRGPGGS GGGGYFGGGG YSGGGGFGGG
GSFGGGGSAG GGGSSRGW