Gene Swol_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1106 
Symbol 
ID4283641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1272449 
End bp1273132 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID638137976 
Productmembrane protein-like protein 
Protein accessionYP_753787 
Protein GI114566633 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00481139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGATAT TTGCTCTGCG GGCCATAGGC ATGTATTTTC TGGCTTTAAT AATGATAAGA 
CTTTTGGGTA AAAGAGCTTT AGGGGAGCTG GGGCCTTTTG ATTTTGTGGT CATGACCGGG 
GTTGGCCATA CGGTGGTTTC AGTAGCCCTG GATAAGAGCC TTCCTTTCTA TGAGGGCATT 
GTCATTCTGG CTACCCTGGC CTTGCTGGAA TATATCATGG GTTACCTGGC TTTGAAGAAT 
CAGACCCTTT CTCACTTAAT AACTGGAAAA CCGGTAATAT TGATTGACAA CGGCCAAATA 
GTAAAAGAAA ATATGGCCAG AGAAAAATTC AATGCCGATG ATCTCTTGCA GGAACTTAGA 
AAACAGGGGA TAAGGGAAAT CGAGGATGTC GATAAGGGGA TCTTGGAATC ATGTGGGGGT 
TTTAGCGTAA TTCTGAAAGA AGAGGATGAG CCGGTAACCC GCCGGGATCT GGGAATCAGT 
CCCCATATAC AATCGACAGT TCCAACTAGC AGTACCATAT CACGGGCTGA ATTCTTTGCC 
CGGCAGCAGG AGCCCTTATT GGCCAGAGAA GGAATTTCGC TAGCCGGACT TTTGCAAAAC 
ATTGACCAGC GCCTGGATTC CATCTGCCAG CGCCTGGATA TATTGGAAGA GAGATTGCAG 
GACGGAGGAC ACAACCACCG ATGA
 
Protein sequence
MLIFALRAIG MYFLALIMIR LLGKRALGEL GPFDFVVMTG VGHTVVSVAL DKSLPFYEGI 
VILATLALLE YIMGYLALKN QTLSHLITGK PVILIDNGQI VKENMAREKF NADDLLQELR 
KQGIREIEDV DKGILESCGG FSVILKEEDE PVTRRDLGIS PHIQSTVPTS STISRAEFFA 
RQQEPLLARE GISLAGLLQN IDQRLDSICQ RLDILEERLQ DGGHNHR