Gene Swol_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1092 
Symbol 
ID4282417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1256939 
End bp1257295 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content46% 
IMG OID638137962 
Product50S ribosomal protein L20 
Protein accessionYP_753773 
Protein GI114566619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000110509 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAG TAAAAGGTGG AGTCACTTCA CATAAAAGAC ATAAGAAAAT CTTAAAATTG 
GCCAAAGGGT ACCGGGGCAG CAAATCCAAG CTCTACCGGG TAGCCAATGA ACAGGTAATG
AAGTCCGGGC AATATGCCTA TATTCATAGG AGATTAAAGA AAAGGGACTT TCGCAAATTA
TGGATTGCTC GTATTAATGC TGCCGCCCGT AATAATGGCA CTACCTACAG CAGAATGGTT
CATGGTTTGA AAGTGGCCGG AGTCGACATA AACCGGAAAT TATTGGCTGA ACTGGCCATC
AGTGATCCCC AGGGTTTCAC CCAACTGGCC GAACTGGCCA AGAGAAGCGT GCAATAG
 
Protein sequence
MPRVKGGVTS HKRHKKILKL AKGYRGSKSK LYRVANEQVM KSGQYAYIHR RLKKRDFRKL 
WIARINAAAR NNGTTYSRMV HGLKVAGVDI NRKLLAELAI SDPQGFTQLA ELAKRSVQ