Gene Swol_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1005 
Symbol 
ID4283711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1142648 
End bp1143883 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content48% 
IMG OID638137878 
Productputative aluminum resistance protein 
Protein accessionYP_753690 
Protein GI114566536 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4100] Cystathionine beta-lyase family protein involved in aluminum resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000549762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGCCT TATCAATAAT AAAGGAGGCA GAACACTCCC TGCAAATGCT GTTTAACGAG 
CTGGAGGAAA TAGCTTATAC CAACCAGGTC AGGGTAATCG AAGCTTTTCA CAAACACCGG
GTCAGGGAGT ATTATTTTTA TCCTTCTACC GGTTATGGTT ATGGAGATAG TGGTAGGGAT
GCTCTGGAAG ATATATTTGC TGATATCTTT GGCACTGAGG ACGCACTGGT AAGGAGCCAG
GTCGTGTCGG GGACTCATGC CATATCCGCC TGCCTATTTG CTCTATTAAG ACCGGGCGAT
GAGCTAATAT CCCTTACTGG CAGCCCTTAT GACACCCTCT GCCGGATTAT CGGCCATGAA
GAGAAATCTC CGGGCACCTT GATAGATAAA GGGATAAAAT ACAGTGAAGT TGATTTGGAT
GAACGGGGTA AACCCGACCT GACAGCTATT GCTGCTGCCA TAAAAGATAC TAGCAGGATG
GTTTTAATAC AGCGTTCCCG TGGTTATAAA ACCCGGCCGC CGGTGGATTT GGATACTATT
GCGGCTATTA CTAAACTGGT TAAAGCAAGA AATCCCGCCA CTATTGTTAT GCTGGATAAT
TGCTACGGTG AATTTACCGC AGTGCAAGAA CCCGGACACT ACGGAGTAGA TATTATAGCG
GGGTCATTGA TAAAGAATCC GGGAGGCGGC CTTATACCTT CCGGGGGATA TATAGCCGGT
AACCAGGATT TGATTGAACA GCTAGCCTTT CATCTTACTG CGCCTGGATT GGGCAAGGAA
CTGGGTGCCA GCCTTTTGGA CAAGCGTATT ATGTATCAGG GTTTATTCCT GGCTCCCCAT
ACGGTTTTGC AGGCTTTAAA GGGTGCGGTT CTTCTAGCCT ATGTTTTTGA AGAACATGGT
TATGAGGTCT TTCCTCGCTG GAACGAAAAG CGCTCTGATA TTGTACAGGC GGTTAAACTG
AGGGATGCAG CTGAGGTTTT GCGCTTCTGC CAGGAGGTAC AGAACGCTTC CCCGGTGGAT
AGTGATGTTA CTTTGGAGTA TGGCGAGTTG CCAGCTTACC GGGATAAGAT TGTCATGGCC
GCCGGTACCT TTGTGCAAGG TTCTTCGATT GAACTTTCCT GTGATGCGCC TTTGCGCTCA
CCCCACTGCG TATTCCTCCA GGGGGGACTT AGCTATGAGC ATTGCCGCTT TCTGTTGCAG
CGTTTGTTGG ATAGGTTTTT ATTGGCAAAT GCTTGA
 
Protein sequence
MTALSIIKEA EHSLQMLFNE LEEIAYTNQV RVIEAFHKHR VREYYFYPST GYGYGDSGRD 
ALEDIFADIF GTEDALVRSQ VVSGTHAISA CLFALLRPGD ELISLTGSPY DTLCRIIGHE
EKSPGTLIDK GIKYSEVDLD ERGKPDLTAI AAAIKDTSRM VLIQRSRGYK TRPPVDLDTI
AAITKLVKAR NPATIVMLDN CYGEFTAVQE PGHYGVDIIA GSLIKNPGGG LIPSGGYIAG
NQDLIEQLAF HLTAPGLGKE LGASLLDKRI MYQGLFLAPH TVLQALKGAV LLAYVFEEHG
YEVFPRWNEK RSDIVQAVKL RDAAEVLRFC QEVQNASPVD SDVTLEYGEL PAYRDKIVMA
AGTFVQGSSI ELSCDAPLRS PHCVFLQGGL SYEHCRFLLQ RLLDRFLLAN A