Gene Swol_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0894 
Symbol 
ID4282061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1011450 
End bp1012115 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID638137761 
ProductMgtC family protein 
Protein accessionYP_753582 
Protein GI114566428 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00160229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATTT ACGAAATAGT GTTCAAGCTT GCTCTGGCCA GTATTCTCGG GGCTTTGATA 
GGCCTGGAGA GAGAGAGCCT GAACCGTCCT GCCGGACTCA GGACCTACAC CCTGGTTTGT 
GTAGGTTCGG CTTTGGCCAT GATTGTATCT ATTGATATCT ACCTGCAGTA TTATCACACA 
GTAAACGCTG ATCCGGGTCG AATAGCTGCC CAAGTAGTTA GCGGAATTGG TTTTCTGGGA 
GCAGGTACTA TCATCAGAGA AGGTGCCACA GTCCGCGGCT TGACTACTGC CGCCGGATTG 
TGGGCTGTAG CTTGTATAGG ACTGGCCGTA GGTTCAGGTT TGTATATTCC GGCTGTGGCT 
ACTACAGTTT TGATTCTTTT TGTATTGATT TATTTTGTTA AATTTGAAGA AAAAATTACG 
GGAATGCGTG ATTACAAGGG CCTGGTTATG GTAGTGGATG ATCGGCCCGG ACAGGTGGGA 
ACCATAGGTT CAATACTGGG TGATCTCTGT GTTTTAATAA AGAATATTCA ATTGACCCGA 
GTAGACGAAG GAGACAGCCT GGAAATTGAA TTACTGCTAC AACTGCCACC CAACTTGTCT 
ATCGAGGAAG TAATACAGGA GTTATCCATC ATCAAGGGAT TACGCAGTAT TGACCGCTTG 
GGCTAG
 
Protein sequence
MGIYEIVFKL ALASILGALI GLERESLNRP AGLRTYTLVC VGSALAMIVS IDIYLQYYHT 
VNADPGRIAA QVVSGIGFLG AGTIIREGAT VRGLTTAAGL WAVACIGLAV GSGLYIPAVA 
TTVLILFVLI YFVKFEEKIT GMRDYKGLVM VVDDRPGQVG TIGSILGDLC VLIKNIQLTR 
VDEGDSLEIE LLLQLPPNLS IEEVIQELSI IKGLRSIDRL G