Gene Swol_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0529 
Symbol 
ID4281258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp627081 
End bp628181 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID638137413 
Product3-dehydroquinate synthase 
Protein accessionYP_753234 
Protein GI114566080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGCT TGCGTGAATT AGAGGTCAGT TTGGGAGAAA GAAGCTATCC GATATACATT 
GAAGGCGGTT TATTGAAAAG CTCTGGTATT TTACTTCGTC AGGTAAGCAG GACCGACAAA 
ATTCTATTGG TAAGCAATCC GACTGTTTTT GCGCTTTATG GCCGGAAAGT GCAAGAAGCT 
ATGGAGAAGC AGGGCTTTAG CGTAAGTGTG GCTCTAATGC CGGATGGAGA ACAGTATAAG 
AACCAGGAAG AAGCCTTCAA GGTTTTGGAC CAGGCAGTGG AAGCTCAATT AGAACGTAGC 
AGCCTAGTAC TGGCTTTGGG TGGGGGCGTT GTTGGTGACC TGGCCGGTCT GGTGGCTGCT 
CTCTACCAGA GGGGGATAGA CTATGTTCAA ATTCCTACCA CCCTCCTGTC CCAGGTGGAT 
AGCAGCGTAG GCGGGAAGGT GGCTATAAAT CACCCGCAGG GAAAAAACCT GATTGGTGCC 
TTTCATCAAC CACGCATGGT TATCATCGAC TATTTGACTC TGGCTACCCT GGACAAGCGG 
GAGTATAAGA GCGGCTTGGC CGAAGTGGTG AAATACGGAA TAATCCATGA TATCAATTTC 
TTCGATTACC TGGAATCACA TGCCGAAGCT ATTAAGGCGC AGGAAGCTGG CTCTCTGGAA 
AAAATAATCT ACGAATCCTG CCGGATAAAG AGCGAAGTGG TAGCCAAAGA CGAAAGAGAA 
ACCGGGCTGC GGGCCATATT GAATCTAGGA CACACCTTTG GCCACTCCTT GGAAAAACTG 
GGTAACTACT CCCGGCTGCG GCATGGCGAG GCGGTGGCTA TGGGTACGAT AGCTGCGTCT 
TTTTTGGCCC GGGAAAAGAA CTATCTGACT GTGGATGAAT TGGAGCGAAT CATAAAGCTC 
TACCGTTGCC TGGGTATTCC TATCCGTTGG CCGGATTTCG AGCCGCCGGC TATTTATGAA 
GGCATGTTGA ACGACAAGAA GGTAATCAAC CATAAGCTGC GCCTGGTCTT ACCCCGGGGC 
ATAGGAAACT TTGTACTCAG CGAGGATATA AGCCGCGAAG AGCTGCTGGC AGCTATCCGG 
CAAGCTCAGA ATAGCTTATA A
 
Protein sequence
MYSLRELEVS LGERSYPIYI EGGLLKSSGI LLRQVSRTDK ILLVSNPTVF ALYGRKVQEA 
MEKQGFSVSV ALMPDGEQYK NQEEAFKVLD QAVEAQLERS SLVLALGGGV VGDLAGLVAA 
LYQRGIDYVQ IPTTLLSQVD SSVGGKVAIN HPQGKNLIGA FHQPRMVIID YLTLATLDKR 
EYKSGLAEVV KYGIIHDINF FDYLESHAEA IKAQEAGSLE KIIYESCRIK SEVVAKDERE 
TGLRAILNLG HTFGHSLEKL GNYSRLRHGE AVAMGTIAAS FLAREKNYLT VDELERIIKL 
YRCLGIPIRW PDFEPPAIYE GMLNDKKVIN HKLRLVLPRG IGNFVLSEDI SREELLAAIR 
QAQNSL