| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0340 |
|---|
| Symbol | |
|---|
| ID | 4281554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 404502 |
|---|
| End bp | 405248 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638137226 |
|---|
| Product | putative sulfonate transport system permease protein |
|---|
| Protein accession | YP_753052 |
|---|
| Protein GI | 114565898 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG GACTGCGCTC ACTGGTCGGT ATCATAGTCT TCATCCTTTT GTGGCAATTA
CTGGCCGTAA TTTTGGACAA GAGTATTATT GTCCCGACTC CAGGAGAGAC CTTTGGTCTT
TTCTTTCATT TGCTGCTCAG CCCGGCTACT TTACTGGCCG GGCTGCAAAC CGCCTGGAAG
GTTTTAATGG CCCTGGGCCT GGTATTGCTC CTGGGACTAC CCCTGGGCTT AATTATCGGG
CTCTTTGAAC CCTTGTATGA TATGTCACGG CCTATAATAA TGGTTATTCA GGCAGTACCG
GTTATATCAT GGCTTTCCCT GGTCCTTTTC ACCTGGGGTA GAAACTGGCA GGGTCCTGTA
CTGATTGCCT TTCTGTCTAT TCTGCCCATA GCTATTCTTA CTACCGTATC CGGGGTACGC
AACCTGGATA AGAAGCTTCT GGAAATGGCC CGCCTTTACC AAGTACCGGC CAGGAAAATT
ATACATGACA TCTATTTTGG TTCCTTGCTT CCTTTTATTA TTGCCATCAT AGATGTCAGC
CTGGGACAAG CCTGGAAGGT TATACTGGTA GCAGAGTATC TTTGTGGAGA CAGCGGCCTG
GGTCTAAAAA TATTCGATGC CCGCAGCTTT GTTGATACTC CTTCCGTTTA TGCCTATACC
CTCCTGGCCG TTTTGCTGGG CATTATAACC GAGAGACTGA TTAAAATGGG AACAGGGAGG
CTTTCGAAAC TATGGGTGCC CGTTTAG
|
|---|
| Protein sequence | MKTGLRSLVG IIVFILLWQL LAVILDKSII VPTPGETFGL FFHLLLSPAT LLAGLQTAWK
VLMALGLVLL LGLPLGLIIG LFEPLYDMSR PIIMVIQAVP VISWLSLVLF TWGRNWQGPV
LIAFLSILPI AILTTVSGVR NLDKKLLEMA RLYQVPARKI IHDIYFGSLL PFIIAIIDVS
LGQAWKVILV AEYLCGDSGL GLKIFDARSF VDTPSVYAYT LLAVLLGIIT ERLIKMGTGR
LSKLWVPV
|
|---|
| |