Gene Swol_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0311 
Symbol 
ID4281612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp375120 
End bp376739 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content42% 
IMG OID638137199 
ProductNa+/H+-dicarboxylate symporters-like protein 
Protein accessionYP_753025 
Protein GI114565871 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA AGAAAGATTT CAGGCTGGAA ATAGCAAGTA TAGAAAGCGC CAGCGATTAT 
GTTCGTGATC TACTAAAACA ATACAAATGC ACCGAGCGTG ACATGGTTCG AGCTCAACTC
TTTACGGAAG AAACGATAGT GTACTGGACG GAAATTGCTG ACGAAGGCGA TATTTTTCAA
ATCAATGTGC GAAAACGCTT TAAAACCATT TCCCTATCAT TATCGTATAG AGGGGCACAA
TCCAATCCTC TTGCCATATC TGATGAAGAA GAGGATGAAG CGGAATTCAG CTTCATCGGT
CAAAATATAC TAATTGGGCT TTCAACCGTT ACCTATAACT ATGAAAACGG ATACAATGTC
ATTACCTTTA CGATCAAGGA AAAAGGAATT AATCCTGTTA TTTTCATTAT TTTCGCCCTT
GCCGCTGCCA TAATCTGTGG GCTGATAGTC AACCGCTTCG CCCCGTCTTT AGGGCCAGGC
CTGAGCGCCT CAATATTGAC TCCCTTGAGT AAAGCTTTTT TCGGCTTGTT GAATGCAATC
GTCATCCCTT TTCTATTCCT GTCAGTTATT GCCAGTATTT TTAACATGGA AAATATCGCC
CAGATGAAGC GTATTTTCCG TATACTGTTT AGTTGGTTTT TGGGACTGAC GGCAATTTCG
GCAGTAATTG CCGTCCTTGC AGGGATAATT TATTTCCCCC TGCAGAGCGG TGCTTCTGCG
GGCGTTAATG AAGTAAACAT TTGGGCGCAA ATCGCCAAAA TGCTGTTTGA TATCATACCT
GCAAACATCT TTCAGTCCTT TTTGGACGGT AACACCTTGC AAACCATTTT CCTGGCTGTC
ATAACCGGTA TTACTATGCT GGTCTATAAA GGACGCTTTC CGGTTATAAG CAAGGTGGTA
AGCGAATCTA ATTTAATTTT TTCTACCTTG TTGGATGCCA TATGTTCCCT GATGCCATGG
GTGATATTCA TTTGCATTTT TGACATGTTG TTGTCCGGCG ATGGCAGAGT GCTTCTCAGT
TCTATCGCTG TGGTTGTACT TATATGTATA TGTTTTCTGC TTATTATTTT ACTTTGCCTC
TTGAGTGTGG CCTTCATTGA AAAACAAAAT CCCATACAAT ACATAAAGAC GATCGGGCCA
GTTCTGCTGA TTGCATTATC CACCGCCAGC TCAAGTGCCA CCTTTGCACC CCATAGCATG
ATCGCCAGTA ACAAACAGGG GATTCGTGAT TATCTGGCGA ACTTCTCCAT TCCTGTGGGG
GCCCTGTTTG CCAAACCGTT TGTGGTGCCG GTCTTATTAT TAATGACATT GTTTGTTGGT
AATTTTTACT CGGTCACTTT CACTATGGCA GATGTCGTGT CTATGGTTCT GCTTTGCATT
ATTTTGTCTG TAGCCGTCCC CCCAATTCAG GGGATGGGTA TCTTTCTTTT TACGATTATC
TTTAAGCGCT TCACTATCCC TCTCGAAGGA TTGGCGATGG CAGCTAGCCT CTTTATGCTC
TTTGATTATC TAATGACCAC CGGCAATGTG TTTTCCGTAA ACATCAGCAT GCTTCACACG
GAACATCGAC TGAGGGAGAA AGAAAAAAGA GTAATAGTTC ACAACAACCA GAAATGTTAA
 
Protein sequence
MKGKKDFRLE IASIESASDY VRDLLKQYKC TERDMVRAQL FTEETIVYWT EIADEGDIFQ 
INVRKRFKTI SLSLSYRGAQ SNPLAISDEE EDEAEFSFIG QNILIGLSTV TYNYENGYNV
ITFTIKEKGI NPVIFIIFAL AAAIICGLIV NRFAPSLGPG LSASILTPLS KAFFGLLNAI
VIPFLFLSVI ASIFNMENIA QMKRIFRILF SWFLGLTAIS AVIAVLAGII YFPLQSGASA
GVNEVNIWAQ IAKMLFDIIP ANIFQSFLDG NTLQTIFLAV ITGITMLVYK GRFPVISKVV
SESNLIFSTL LDAICSLMPW VIFICIFDML LSGDGRVLLS SIAVVVLICI CFLLIILLCL
LSVAFIEKQN PIQYIKTIGP VLLIALSTAS SSATFAPHSM IASNKQGIRD YLANFSIPVG
ALFAKPFVVP VLLLMTLFVG NFYSVTFTMA DVVSMVLLCI ILSVAVPPIQ GMGIFLFTII
FKRFTIPLEG LAMAASLFML FDYLMTTGNV FSVNISMLHT EHRLREKEKR VIVHNNQKC