| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0237 |
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| Symbol | |
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| ID | 4281641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 275749 |
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| End bp | 276294 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638137134 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_752960 |
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| Protein GI | 114565806 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000352191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA TCATCAGAGG CAGGAACATT GAGATTACCG ATGCTCTAAA AGATTACACC
ACCAAGAGGC TTTCCAAGTT GGAAAAATAC ATCGATGATG TAAAGGAGGC ACAGGTAGCT
TTATCAATTG AGGGAGAGGA TCATAAAGTC GAAGTTACCA TACCCTTGAA TGGAATAATC
CTCCGGGGAG AGGAAATGAG CGATGATATG TACAGCTCCA TTGATATGGT GGAGGAAAAG
CTGGAAAAAC AGATTGAAAA GTATAAAACC CGGCTTTACC GGAGCAACCG GGGCGCAGGC
CTGAAGAAGG CTCTGGCCGA GGAAATCAAA AAAGAATTGG ATAAGGGCGA AAAAATTGAG
AAGTTTAAGG TCGTTCGCAG CAAGAGGTTT GCCTTAAAAC CCATGGATGT AGAAGAAGCC
ATAATGCAAA TGAATCTTTT GGGACACAGC TTTTTTGTAT TCTTCAATCC CCAGAGCGAA
GAGGTAAATG TAGTCTATAA AAGGAAAGAC GGAAATTACG GATTAATTGA GCCGGATTTC
GATTAG
|
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| Protein sequence | MKFIIRGRNI EITDALKDYT TKRLSKLEKY IDDVKEAQVA LSIEGEDHKV EVTIPLNGII
LRGEEMSDDM YSSIDMVEEK LEKQIEKYKT RLYRSNRGAG LKKALAEEIK KELDKGEKIE
KFKVVRSKRF ALKPMDVEEA IMQMNLLGHS FFVFFNPQSE EVNVVYKRKD GNYGLIEPDF
D
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