Gene Swol_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0208 
Symbol 
ID4281458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp255678 
End bp256892 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content32% 
IMG OID638137105 
Productmethionyl-tRNA formyltransferase-like protein 
Protein accessionYP_752931 
Protein GI114565777 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.491531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA TAGATATTTT TTTAACATCA CTCAATACTG CATTGAGGAA AATTGAGAAC 
AAGTATTTCA ATGTCCCAAA CCATAATAGA CACTATCCAG TCTTTAGGGA GAGAATATAT
TGTTATGAAT TATACCATCA ATTGAGGAAC AATCTTCCTG AAGGTTTCCC ATTTACAATT
CATGGCGAGC TCGATAAGGT GGTTAATATT TCTATTCATG AATTATTAAG AACAAAAAAA
CCTGATTTTG TAGTTCATGA GCCGGGCTCG AATTATAACC TTATCGTAAT GGTAGTTAAG
TCTATTAATA ATACGGAGAA TGATATAATT AATGATTGCT ATAAACTAAT TAATTTTAAA
AATCATGCAA ATTATACCCA GCCAATAATG ATTGTATTTG GTGAAAAAGA AAGGGAAAAA
GACGAAGAGT TAATACATAA TGTTAAATCA ACGCTTATTA GAGACGGTAA ATGTGGAAAC
AACTTTTTAT TAATTTGGCA TAAGTCTTTT GATAAAATAA AATATTGGCA TATAAATAAA
GATGTTGTAT TGGAAAATCA AAAAGACAAA TTAAACATTA CTGTTGTATC GGATTTGAAT
AGCTGGCTTA ATATATATAT TCCTTTATTG TTAAAAGAGT TGGAAAAGAA GAACCACATT
ATAAGATGGA CTAACGATGT AAAAACAGTT TTATATGGTG ATCTTGCCTT CTATCTTGGC
TGTAGACAAA TTGTCCCTTC CGATATTCTA GAAAAGAATA AGCATAACCT GGTTGTTCAT
GAAAGCGATT TACCCTGGGG TAAAGGTTGG TCACCTCTTA CCTGGCAAAT ACTAGAGGGA
AAAAACGATA TTCCTATAGT CTTATTTGAA GCAGCTGAAA AAGTAGATAG TGGCGTAATT
TATTTAAAGG AAACAATGCA TTTTACAGGA ACTGAACTTG TCGAAGAATT GCGGGCAACT
CAGGCTGATA CAACATTTAA ATTGTGTTTG GAATTTATTG ATAACTATCC CGATATTATA
GATAAAGCTG TTAGCCAAGA AGGAGAAAGC AGTTATTATC GTCGCAGAAC CCCTGAAGAT
AGCCGCCTTG ATCCAGATAA AACTATAAGA GAACAGTTTG ACCTTCTACG AGTGGTGGAT
AATAAGCGCT ATCCTGCCTT TTTTGAGTTA AATGGAGAGC AATATCTTTT AAAAGTTTTG
AAAAAAGGAA ATTAA
 
Protein sequence
MEDIDIFLTS LNTALRKIEN KYFNVPNHNR HYPVFRERIY CYELYHQLRN NLPEGFPFTI 
HGELDKVVNI SIHELLRTKK PDFVVHEPGS NYNLIVMVVK SINNTENDII NDCYKLINFK
NHANYTQPIM IVFGEKEREK DEELIHNVKS TLIRDGKCGN NFLLIWHKSF DKIKYWHINK
DVVLENQKDK LNITVVSDLN SWLNIYIPLL LKELEKKNHI IRWTNDVKTV LYGDLAFYLG
CRQIVPSDIL EKNKHNLVVH ESDLPWGKGW SPLTWQILEG KNDIPIVLFE AAEKVDSGVI
YLKETMHFTG TELVEELRAT QADTTFKLCL EFIDNYPDII DKAVSQEGES SYYRRRTPED
SRLDPDKTIR EQFDLLRVVD NKRYPAFFEL NGEQYLLKVL KKGN