Gene Swol_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0143 
Symbol 
ID4282031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp164860 
End bp168912 
Gene Length4053 bp 
Protein Length1350 aa 
Translation table11 
GC content44% 
IMG OID638137043 
Producthypothetical protein 
Protein accessionYP_752869 
Protein GI114565715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.176773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAAGA GAAGGAATTA TAAAGTCATA GCCTTAACTC TAACCTTTTT GATGTTGTTT 
GCATCAGTAG CATCAGCTGC TATTCCTACA GACAGCGTTA TCATTGGGGA CAAGGCGTAT
AGCATTGGCT ATGTCACTAA TCCCGCCAAT GCAGCAGAAA TCCAAGCCGC TCTTGACAAC
CTGGGAACAG GTCAACTTGC CTATAATATT GATGGTCAAA CAAGCGGATG GACTTCAATA
ATGGAGGGTA CACCCTTAAC AGCAGATCAG ATAACAGCTT TACCGCCCAT CACTTATAAG
AATGATGCCG GTGAAGTGTC TAATTATGCA GCTGGAGACG GCGACTTGAT ACCGAGCGGC
TTGGCTGTTA GCAATGTAGT TGCCGATAAT GGCAACATTA CTATCACCGT GACAGGTGAA
GGCACACCGG TAGAAGGTGA TTTCACTTTC GTTTCCAGAA TAGGTGATGC AGCAAAGGCT
GACCTGGCTG TAAGCAACTT TAACTGGACC GAAGCAACCA AGACGGTTAC CTTTACATTT
GCACCCTTTG CTGCTACCGA TACAGCACAA TCAATTGAAA TTGGCTGGCA GTATAAAGAC
AGCAAAGGAT GGGCAGCTGC TTTCACAGTT CCAGCAGCAG AAGGGTTGGA AATTACTAAT
CTAAGTGCTA TTAATACGAC AACCATCAAG GTTACATTCA GCGGTGAAGT AACTGCCGAG
CAAATGGCTG TTGCCAACTA CACCGTAAGT AAAGGTACGA TTGAATCTGT AGCCAAGACC
GGTGATGAGA ACAAGGCGGT TGTCTTAACT GTTGCCGGGC TGAACTATGA AGATGCCCTT
ACTGTAACAG TTGTTAAACC AGCGTACACA AAAGATATCA AGGTACCTAA AATTAGTGAC
CTTTACGAAC TGAAAATTAT CTGTGATGCT CCCGGTAATA CCATTAAATC TGATGGTGCA
TCCATGACCA TGCTTACTGC TCAGATTATT GAAAAAGCTA ACAATGAACC GGTAAAAAGA
GATGCCCAAA TTCAGTTTAG TGCCACCTTG GGTTCATTAT CACAGCCCCA GGTAGCTTTA
CAAGATGGTA AAGCATCAAC CCAATTACGT TCAATTGCAT CTCCTACCAG TGTTACTTCT
GTAATAACCG GAGTTGTAGC CAGTGCACCT GGTGCTGAGG CTTTTGTGGG TTTGAACGGA
CAACTTATCG TTAACTTCAC ACCTGAAGGC GTAGACCCAG GTTCTACAAC AATGGTAAGT
GCTGTATCTG CAGGAGCAGA CCAGGGGGAT AGATTCTTCG TTAAGTTCTC CGGCAAGATA
GATGCAACTG CCTACAAAGC GGTCGTAACT TCTCCAACAT GGATAGCGGC AGGTAAATCA
ATCTACGGTA TTAAATATGT AGATGGCGCC AATGCTAAAC AAGTCATTGC CATCAAAGAT
GTATACAATT TAACTGATGA TACCTTGATG TTTGTATTGG ATACGGACAG TCCAGGTTCA
GTCCAACCAA CGTCCAATAT GCTGGATGCA GCTTATGCTG GTGCTGGTGC GCCGAACTTC
TTAAGAGACA ATGTTAACCA TACTATTGTA ATTCCGGATA ATGTTACTGA CCTTGTTGTT
AACAGTTCCA ATATTACATT TATGATGTCA GATGTAACCA AACCGTTTGT ATATGGCGTA
GAAGCAACCA CCTGCATGAA TGTAAAAGTT CGTTTCTCTG AAGCCATAGC AGAAGACCTG
TCAGAAGGCG CAGCAGGGGC AATTAACGGC AAGTTCACCA TTGATGGTAA ACAATTAAGG
TATATTGCAG TCCCAACACA AGCTAATATT GATGCTGCCA AACTTGCCAA TGAAATCATT
GTTACCGACT TAAAAGTTGG TTCCTGGTCT GGCCATGATA AAGAAATAGC TAATGACAAT
AGCAGAAACA TGGTCTATAT TTCAATTCAC AAAGACTTTA AATTACCTTC TGGAACTCAT
GGTATCCAGA TAGCCAATGT AGGTGATTGG GCTGGAATGA CCGATAAACC ACAAAACATA
GTTACCACCC AGACCTTCAC CTTTGAGGTA AAACCAGACA CTGAGGCACC TACTGTTACT
GTAGAGGTAC AGTCACCGGA ACAGTACTTG ATTACATTCT CCAAGCCGGT AGATACTGTA
ACTGGCAAAA CTGTAGTTGA TGCCGTAAAG ATTTATACCA AAGAAGGCTA TACTGCTTCA
ACGAAGACTG CGTTAACCCA GAACGTCAAC TCACTTGCTG GCGACTATGT GATAACCATT
GTAGATGAAG AAGGAATGGC CGTTGGTGCT CATTTAGCTA CTACTGCCCC CTTAACCGGC
GTAAAAAGAC TTCTGGTTGA ATGCAACCGT GACTGGTCAG TAAGACAGCA AGGCCAGGCC
ACTGAAAAGG ATAACTACTG GAAGTCCGGC CTGAATCCGT TCACATTTGT AATTTCTAAT
GTTGAATCCC AGACCGGAGT TGCAATGGCT GAAACTGCAA TTGATAAGAC CCTGCAGTAT
GACGGGACGT CACCAAACAT AGACACCGCT ATTGACCTCT ATGAAAAATC GCCTAAAAAA
GCATATAGAG GGCTAACAGC TAATACTTCC GGACAATTTG TCTTCGTCAA AATGACCGAA
CCAGTTCAAT TAGTTAACAG TAACGGTACT GCGGTATCAG ATCCGGTTAC CCCCAATCTA
CAGCAGGATC CGACTCCGGC AGCTTATGGT GCTACTACCG GATTGCCGAG ACAAACCTAC
CGGTTTATCT TTGATGCTAA TCCGGATAAA GTAGTTGTAG GTTCTGTTGC TCTTGGTACC
CTGGCCGAGG ACGATACAAC CTTTATCATT GCTCCAAATT CTCAGCTAGA TGCAGGTACC
TGGACATTGT ACATCGAACA GATCTCCGAT GACCATGGTA ATACCTCCGC AACCATCAAT
AGGAAAGTTA CCGTACCCCA AACTGCACCT ACCACAACAG ATACCAAAGT AGCATGGGCC
GCATTTGATA ATAATGCAGC ATTGGGAGCT ACAGATTATG ATTACCTATA TGTCAAGTTT
ACCAAGGTCA TGAAAGCCTA CACTGCCAAT GGTGTAGACG CAACCACCAA CTATAAGTTC
AGGGGTTATG ACCTGCCCGA AGGTTCACAG GTATTCAGAG GCATTGACAA CGTTACCGAT
GATTGGGACG GCGTAACCAT CAGAATGCCG AAAACTGCCT GGGATGGCTT AGCCGGTAAT
TTTTCAACCA ATATGGCAGT CGCCAGCAAC TTCCAATCTT CTGGTGATGA AGCATTAAGC
GGGCCCTTCC AGTTCGAGTT GACTAACAAT GCAGGTGGAT CAATAGCTGA CAAAGACGGT
CTAACCGGTG CAAACAAATT TGAAGCTGTA TACATTAATG CTGGTACTGC CTTGGTTGGC
GGAAAGATTG TTATCCAATC AGTGGCTAAG GATGACGATC CTGCTCCTAA TGCAGATGGC
GATATTGATA CCATCGTAGT GACTACAGAC CAAAATTCAA CTACTGTGGC CGGCGATTAT
ATCATGGTTA ACGGCAAGAA GTTTATTACC GGCGGCGCAG CAGCAGCAGC AACACAAACC
TTCGTAGCTA ATGGAGCAGT CACTACTGGC TCTGTTGGAC CTGAAGAAAT TGCCGGAACC
ACATCAAATG GCCTGGTGAT TAAAGCAGCC AATGGAAGTA TCATTACTAA TCTTGGCAAA
GTTGTTGACG CCGCAGGCCC GGCAATAACT GTTATCGGCT GTGTATATGG ATCATCAACT
ATAACAGTTA CTTTCTCAGA GGCTATAGAT GATAGTACAG TTATTCCTGG CGACTTTAAC
CTCGGAGGAA CTGGTCTTAC CGGTGGAACA ACAATTAGTT CGGTGAATAC TGGTACAACT
GCAAATGATA ATATCATAGT TCTTAATTTA AGTGCTGCTC AGACACCAGC TGTTGGTCAG
ACACTTACTG TAGCATTAAG CGCTCCTGGT GTAATCAGCG ATAGAAAAAA TGTTGTATCA
ACTCAAACTG TGGCAATAAG TAAAACCTAT TAG
 
Protein sequence
MIKRRNYKVI ALTLTFLMLF ASVASAAIPT DSVIIGDKAY SIGYVTNPAN AAEIQAALDN 
LGTGQLAYNI DGQTSGWTSI MEGTPLTADQ ITALPPITYK NDAGEVSNYA AGDGDLIPSG
LAVSNVVADN GNITITVTGE GTPVEGDFTF VSRIGDAAKA DLAVSNFNWT EATKTVTFTF
APFAATDTAQ SIEIGWQYKD SKGWAAAFTV PAAEGLEITN LSAINTTTIK VTFSGEVTAE
QMAVANYTVS KGTIESVAKT GDENKAVVLT VAGLNYEDAL TVTVVKPAYT KDIKVPKISD
LYELKIICDA PGNTIKSDGA SMTMLTAQII EKANNEPVKR DAQIQFSATL GSLSQPQVAL
QDGKASTQLR SIASPTSVTS VITGVVASAP GAEAFVGLNG QLIVNFTPEG VDPGSTTMVS
AVSAGADQGD RFFVKFSGKI DATAYKAVVT SPTWIAAGKS IYGIKYVDGA NAKQVIAIKD
VYNLTDDTLM FVLDTDSPGS VQPTSNMLDA AYAGAGAPNF LRDNVNHTIV IPDNVTDLVV
NSSNITFMMS DVTKPFVYGV EATTCMNVKV RFSEAIAEDL SEGAAGAING KFTIDGKQLR
YIAVPTQANI DAAKLANEII VTDLKVGSWS GHDKEIANDN SRNMVYISIH KDFKLPSGTH
GIQIANVGDW AGMTDKPQNI VTTQTFTFEV KPDTEAPTVT VEVQSPEQYL ITFSKPVDTV
TGKTVVDAVK IYTKEGYTAS TKTALTQNVN SLAGDYVITI VDEEGMAVGA HLATTAPLTG
VKRLLVECNR DWSVRQQGQA TEKDNYWKSG LNPFTFVISN VESQTGVAMA ETAIDKTLQY
DGTSPNIDTA IDLYEKSPKK AYRGLTANTS GQFVFVKMTE PVQLVNSNGT AVSDPVTPNL
QQDPTPAAYG ATTGLPRQTY RFIFDANPDK VVVGSVALGT LAEDDTTFII APNSQLDAGT
WTLYIEQISD DHGNTSATIN RKVTVPQTAP TTTDTKVAWA AFDNNAALGA TDYDYLYVKF
TKVMKAYTAN GVDATTNYKF RGYDLPEGSQ VFRGIDNVTD DWDGVTIRMP KTAWDGLAGN
FSTNMAVASN FQSSGDEALS GPFQFELTNN AGGSIADKDG LTGANKFEAV YINAGTALVG
GKIVIQSVAK DDDPAPNADG DIDTIVVTTD QNSTTVAGDY IMVNGKKFIT GGAAAAATQT
FVANGAVTTG SVGPEEIAGT TSNGLVIKAA NGSIITNLGK VVDAAGPAIT VIGCVYGSST
ITVTFSEAID DSTVIPGDFN LGGTGLTGGT TISSVNTGTT ANDNIIVLNL SAAQTPAVGQ
TLTVALSAPG VISDRKNVVS TQTVAISKTY