| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0049 |
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| Symbol | |
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| ID | 4282344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 58002 |
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| End bp | 59939 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136952 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_752778 |
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| Protein GI | 114565624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000287272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGAGAA AGAAAAGTTA TTACATCACC ACTCCTATTT ATTACCCCAG CGATAATTTA
CATATTGGGC ATGCCTATAC CACCGTGGCC GCTGATTGCA TGGCCCGTTT CAAACGAATG
CAGGGTTATG ATGTTTTTTA CTTGACCGGT ACCGATGAAC ACGGGCAAAA GATCGAAAAA
GCGGCCCGGG AGAAAGGTAT GGAACCCATC AAGTATGTGG ATGGTATCGT AGAAAGCATC
CGCCAGCTCT GGGAAACCAT GCTGATTACC CATACAGATT TTATACGCAC CACCGAAGCC
CGGCATGAGC AGTTAGTACA AAAAATATTC AACAAGGTCT ATGAACAGGG AGATATTTTT
ATTTCCCAGT ATGAGGGCTG GTATTGCACC CCCTGTGAGA CATTTTTCAC GGAAAGACAG
CTGGCCGAAG GGAATTGCCC TGATTGTGGC CGTGAAGTGG AGCTATTGAA GGAAGAAAGC
TATTTTTTCA ATATGTCTAA ATATGCTGAT CGCCTGCTGG AGCATATTGA AACTCACCCG
GATTTTATTC AGCCCGAATC CCGGCGTAAT GAAGTAGTCA ACTTCATAAA AATGGGTCTG
GAAGATCTGT GTGTATCTCG GACTACCTTC CAGTGGGGGG TACCGGTGCC CTTTAACCAA
AAGCATGTGG TATATGTCTG GTTTGATGCT TTAATAAACT ACCTGACAGC TATAGGTTAT
ATGGATGATG AAGAAAAGTT TAAGCAGTAT TGGCCAGCGG ATGTACACTT GATGGCCAAA
GACATAATTC GCTTTCATGC GATTATTTGG CCCATAATGT TGATGGCTTT GGATTTACCT
TTGCCCAAAA AGGTCTGTGC CCATGGTTGG ATAATGCTGG AGGGCGGGAA GATGTCCAAA
TCCAAGGGAA ATGTGGTTGA TCCGGTTGTT TTGGTTAAGA AATACGGAGT TGATGCGGTA
AGATACTACC TGGTCAGGGA ACTGAGTTTT GGCCAGGATG GCTATTATTC GGAAGAAATG
CTGGTAAATC GTATAAATTC TGATCTGGCC AATGACCTGG GTAATCTTAT CAGCCGTACT
ATAGCCATGA TAGAGAGATA TTTTGATGGG GTTATACCCG TTTCGGGTAT AGCGGAAGCC
CTTGATGAGG ATTTAATAAA TACGGCCCGG GAGGCGTACC GGGAAGCTAC TGAAAAACTG
GATAAACTGG ATTTCGCCTC ATATATAATG GCTACTCGCA AGCTGGTATC GCGGGCCAAT
AAATATATCG ATGAAACTGC GCCCTGGCTT TTGGCTAAAG AGGTAGCGAA AAAAGAGCGC
CTGGCCAGCG TCATGTATAA CCTGGCAGAG AGCATCCGTA TCGCCCTGAT AATGCTGGCT
CCATGCATGC CGACACTACT GTCCAGAGCC AACCGTCAAA TAGAGATATT TGACCTTAAT
CAGAATCTTG ATTGGGATGA AGCGGCGGAG TGGGGTCGTT GTAAAGCTGG CAGCAAGGTT
CGCCGGGGCG AGCCCCTGTT CCCGCGGATA GATATAAAAT CCCTGGAATC TGGAGAGCAA
CTGCCTATGG AGTCACCCGG GGAGAAAAAA GTGGAGAAGA GCCCGCCCGC TGTTACGGAA
TTGGTTGATA TTGAGGAATT TGCCCGGATC GATCTGCGGG TAGCTGAAGT TATCGCTTGC
GAAAAAATGA AGAAGGCTGA TAAACTACTG GTTTTACGCT TGCGAGTGGG AGAGGAAGAA
CGCACAGTAG TTTCAGGTAT TGCGCAATAT TATTCCCCGG AGGAATTGCT GGGTAAAAAA
GTGGTGCTGG TAGCCAACTT GAAGCCGGTA AAATTAAGAG GGGTATTGTC TCAGGGGATG
ATACTGGCCG CTGATGGAGA TAAGGTGGAG GTTTTGCTGG TGGATCAGGA TGTACCTTCT
GGAAGCCGGG TGAAATAG
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| Protein sequence | MQRKKSYYIT TPIYYPSDNL HIGHAYTTVA ADCMARFKRM QGYDVFYLTG TDEHGQKIEK
AAREKGMEPI KYVDGIVESI RQLWETMLIT HTDFIRTTEA RHEQLVQKIF NKVYEQGDIF
ISQYEGWYCT PCETFFTERQ LAEGNCPDCG REVELLKEES YFFNMSKYAD RLLEHIETHP
DFIQPESRRN EVVNFIKMGL EDLCVSRTTF QWGVPVPFNQ KHVVYVWFDA LINYLTAIGY
MDDEEKFKQY WPADVHLMAK DIIRFHAIIW PIMLMALDLP LPKKVCAHGW IMLEGGKMSK
SKGNVVDPVV LVKKYGVDAV RYYLVRELSF GQDGYYSEEM LVNRINSDLA NDLGNLISRT
IAMIERYFDG VIPVSGIAEA LDEDLINTAR EAYREATEKL DKLDFASYIM ATRKLVSRAN
KYIDETAPWL LAKEVAKKER LASVMYNLAE SIRIALIMLA PCMPTLLSRA NRQIEIFDLN
QNLDWDEAAE WGRCKAGSKV RRGEPLFPRI DIKSLESGEQ LPMESPGEKK VEKSPPAVTE
LVDIEEFARI DLRVAEVIAC EKMKKADKLL VLRLRVGEEE RTVVSGIAQY YSPEELLGKK
VVLVANLKPV KLRGVLSQGM ILAADGDKVE VLLVDQDVPS GSRVK
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