Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_R0028 |
Symbol | |
ID | 5197246 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2808933 |
End bp | 2811552 |
Gene Length | 2620 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | 640582076 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.781404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGAGTTAATT GGGAAGGATA TCACCGAAGT GAATACATAG CTTTGGTGAA GCGAACCCGG CGAACTGAAA CATCTCAGTA GCTGGAGGAA AAGACATCAA CCGAGATTCC GTAAGTAGTG GCGAGCGAAA GCGGACCAGG CCAGTGCCTG ATGGTGAATT AGCAGAACAC TTTGGAAAGA GTGGCCATAG CGGGTGACAG CCCCGTATGC GAAAGTGAAA CATCAGGACT TGAGTAGGGC GGGACACGTG TAATCCTGTC TGAACATGGG GGGACCACCC TCCAAGCCTA AATACTCGTG CATGACCGAT AGTGAACAAG TACCGTGAGG GAAAGGTGAA AAGCACCCCG ATGAGGGGAG TGAAACAGTA CCTGAAACCG AATGCCTACA AGCAGTTGGA GGGTCTTTAT GGCCTGACAG CGTACCTCTT GCATAATGGG TCTGTGACTT AATGTATCAA GCAAGCTTAA GCCGATAGGT GTAGGCGCAG CGAAAGCGAG TCTGAATAGG GCGACTTAGT TTGATGCATT AGACCCGAAA CCCGGCGATC TAGGCATGAC CAGGATGAAG GTGGGGTAAC ACCCACTGGA GGTCCGAACC GATTAACGTT GAAAAGTTAC CGGATGAGTT GTGTTTAGGG GTGAAAGGCC AATCAAGCCG GGAAATAGCT GGTTCTCCGC GAAAACTATT GAGGTAGTGC CTCGGATGAA CACCGTTGGG GGTAGAGCAC TGGATGGATG CGGGGGTCGC GAGATCTACC AAATTCAACC AAACTCCGAA TACCAACGAG TGATATCCGG GAGACAGACG GCGGGTGCTA AGGTCCGTCG TCAAGAGGGA AACAGCCCTG ACCTACAGCT AAGGTCCCCA AGTCGTGTCT AAGTGGGAAA GCATGTGGGA ATCCCAAAAC AACCAGGAGG TTGGCTTAGA AGCAGCCATC CTTTAAAGAA AGCGTAACAG CTCACTGGTC TAAACAAGGG TTCCTGCGGC GAAGATGTAA CGGGGCTCAA GACACGCACC GAAGCTTAGG GTGTGGATTT ATCCACGCGG TAGCGGAGCG TTCCGTAAGC CTGTGAAGCG GTCTGGTAAT GGGCCGTGGA GGTATCGGAA GTGCGAATGC AGACATGAGT AGCGATAAAC AGGGTGAGAT GCCCTGTCGC CGAAAGACCA AGGGTTCCTG CGCAAGGCTA ATCCGCGCAG GGTGAGCCGG CCCCTAAGAC GAGCCCGAAG GGGGTAGTCG ATGGGAACCA CGTTAATATT CGTGGGCCTG GTGGTGTGTG ACGGATCATG TGTGTTGTAC GTCCTTAACG GATTGGACGT GCTTCGAAAT GGTTCCAGGA AATAGCCCCA CCGTATAGAC CGTACCCGAA ACCGACACAG GTGGTCTGGT AGAGTATACC AAGGCGCTTG AGAGAAGTGT GCTGAAGGAA CTCGGCAAAT TGCCTCCGTA CCTTCGGAAG AAGGAGGCCC CACGATTGGG CAACCAGTTG TGGGGGGCAC AGGCCAGGGG GTAGCGACTG TTTAGCAAAA ACACAGGGCT CTGCTAAGTC GGCTTCAAGA CGACGTATAG GGTCTGACGC CTGCCCGGTG CCTGAAGGTT AAGTGGAGGG GTGCAAGCTC CGAAATGAAG CCCAGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAACGA CTTCCCCACT GTCTCCAGCA CATGCTCAGC GAAATTGAAT TCTCCGTGAA GATGCGGAGT ACCCGCGGTT AGACGGAAAG ACCCCGTGCA CCTTTACTGC AGCTTCAGAG TGGCATTAGG AAATAACTGT GTAGCATAGG TGGGAGGCTT TGAAGCCGGG ACGCCAGTCC TGGTGGAGCC ATAGGTGAAA TACCACCCTG TTGTTTTCTG ATGTCTAACC TCGAACCATG AAACTGGTTC AGGGACCCTC TGTGGCGGGT AGTTTGACTG GGGCGGTCGC CTCCCAAAGA GTAACGGAGG CGCGCGAAGG TTGGCTCAGG CCGGTTGGAA ACCGGCTGTT AGAGTGCAAT GGCATAAGCC AGCCTGACTG CGAGACTGAC AAGTCGAGCA GAGACGAAAG TCGGTCATAG TGATCCGGTG GTCCCTCGTG GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CGCCGGGGAT AACAGGCTGA TAACCCCCAA GAGCTCATAT CGACGGGGTT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG GAGCAGGTCC CAAGGGTTTG GCTGTTCGCC AATTAAAGTG GTACGTGAGC TGGGTTCAGA ACGTCGCGAG ACAGTTTGGT CCCTATCTGC CGTGGGCGTC GATATTTGAG AGGAGTTGAC CCTAGTACGA GAGGACCGGG TTGAACGTAC CTCTGGTGGA CCTGTCGTGG CGCCAGCCGC GCAGCAGGGT AGCTATGTAC GGACGGGATA ACCGCTGAAA GCATCTAAGC GGGAAGCCTC CCTCAAGATA AGATATCTTA GAGCGGTCGA AGACCACGAC CTTGATAGAT CGGATGTGGA AGCGCGGTAA CGCGTGGAGC TAACCGATAC TAATTGCTCT AGTCGCGCTT
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Protein sequence | |
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