Gene Swit_5360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5360 
Symbol 
ID5195661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp268207 
End bp269502 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content66% 
IMG OID640579287 
Producthypothetical protein 
Protein accessionYP_001260235 
Protein GI148550796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.791015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTGA TCGACCGACA GGGCGACGGA CAAAAAGGTC GTCGCATCCC CCTTCCCGAC 
CTCGTGCGGT CCGCACTGGT GCGCTGGTAT ATGGGCGAAG GCTCGCGCGG CGATGAAGAG
GCGGGGATCG CGCTTGTCCA GCAAGCCCGG ATCGGCGCCA AGTGGATCGC ATGCGACTGC
CTGGGTCCCG ACACCCGGCC GCCGGTCCTG ACCCCTGCCT TTCTGTCGGA AGCTGAAACC
TATTATCTGC GGCGGCTGAC GGGCGCCGAC CGGCCCGAGC ATCGTCCCCA ATGCCCCTTC
TTCCGCGAGC AGGCGACCAA TCGCTTTTCG GAGATCCGCA CGCCCCATTC GCCGGCCGAT
CCTCCGGAAG GCTATTTCGA AGTGCTGCGG CCAGCCCCTG AGAAGCTCGC GCAAAAGCCG
CAGGCCGACA GTATCGACGA CAGGACGCGC AATGCGACGG TGCCGCGTCT CGCCCGCCTT
CTCTGGCGTC TTATGACCCT GGCCGGTGTC CATCGCACGC CGCCGGTTGG AGCGGAGCCG
CCCGAACGCT CCATTGCGCA AGAATTCAGG GCCCTGAGCG CGGCGGCCGC GCGGATCGAG
CTTGCACCCG GCATCGAGCT CGGCCGCGCC TTATGGACAC ACGCCCGTCC CTTTCACAAC
AATCGCGTGT TCGCAGGCCT GCGCGCGCTA TCCCATCAGT GGCCACCGGG TCACGCGCCG
CAGGCCTTCC TCGCGCTCTA CGCAACAGCG GTGCAGGGTG CGACCATCCA TGTCGCGGGC
GCCGAGCCAC TGATGCTCGC CAATCGGGTG CAGTCACCAT CAATCCGCGG CAACCCGATC
AAAGGTCCTT ACCTGGTGCT GGTCGTGGTC GGCGAATATC CCGAGGCCGA CGGTTATGCG
GCGCTGCGGG CCTATGCGCA GCCCATCGTC TCGGGCCGGC GTTTCGTGCC GGTTGCCTCC
GAATTCGAGC GTTCTCTCTT TCGCGGCCTG CTCGACGCGC GATGCGCGCT CGATCGCCTC
GGCATAGACC TGGTGATCGA AAAGCCGCTC TTCGACCAGT TGACCCCGCA AGGCCCCTGT
CGGCCCGACT TCCTGCTTGA AGCGCAGTCG AGGGAGACCG GCGAAATCCG GCAGCTGGTC
GTTGCGGCGC AGAGCGCGCT CGACGAGGAC CATCTGGCAG TGAAAGCCGC CATCTATCCG
CGCCTCGAGA TGATCGCGCC GCTCATTACT CTCGGGCCCG ATGCGCTCGA GCGGGGTGCC
ATACCGGATA TCGTACGAAC CGCCCTAGGC GTATGA
 
Protein sequence
MWLIDRQGDG QKGRRIPLPD LVRSALVRWY MGEGSRGDEE AGIALVQQAR IGAKWIACDC 
LGPDTRPPVL TPAFLSEAET YYLRRLTGAD RPEHRPQCPF FREQATNRFS EIRTPHSPAD
PPEGYFEVLR PAPEKLAQKP QADSIDDRTR NATVPRLARL LWRLMTLAGV HRTPPVGAEP
PERSIAQEFR ALSAAAARIE LAPGIELGRA LWTHARPFHN NRVFAGLRAL SHQWPPGHAP
QAFLALYATA VQGATIHVAG AEPLMLANRV QSPSIRGNPI KGPYLVLVVV GEYPEADGYA
ALRAYAQPIV SGRRFVPVAS EFERSLFRGL LDARCALDRL GIDLVIEKPL FDQLTPQGPC
RPDFLLEAQS RETGEIRQLV VAAQSALDED HLAVKAAIYP RLEMIAPLIT LGPDALERGA
IPDIVRTALG V