| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5338 |
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| Symbol | |
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| ID | 5195594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 243850 |
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| End bp | 249654 |
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| Gene Length | 5805 bp |
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| Protein Length | 1934 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579265 |
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| Product | hypothetical protein |
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| Protein accession | YP_001260213 |
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| Protein GI | 148550774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.625438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGGA ACCCGGGGCT AAATGCCCGC GAGAAGCTGT CCCCCGTGGT GGCGGAACCG
GAAGTGATGA CGCAGCAGCT GCATCGGGCG ATGATGTCGC CCTTGCGTGG CCAAGTCAAA
CCCCATGCCA GCCTTCCGCC GAGATGTCGC TCGCCGGCCT TGCGCGTAGC ACGGCGCATG
GGCAACGTGT GCGGAGGGGG AAAGTCGATC GCAACCGTAA GCCCAGACCG CAGCCCAGCT
GCCTTGTCCG AGCGCGCCAG TCCATTGGCG GCCTTGCCCC CGCGCGCCCA TATCGAGCGC
ATCGCAAGTC GGAAGATCAA GGGCTTCTGC GGCACAATCG ACGAGGACGG TGTTTATTAC
GATCCTGTCC ACAAGCAGAA CCAGAGCCTG TCCCAGCACA TCATCGCAGA CTATCACGGC
CGCTTCCTGA TCGAACTTAT CCAGAACGGG CACGACGCGC ATGATAAGGC GCGACGGGAT
GGAGAGATCG CTGTCCTGCT CGCGGGTGAT GAAGGCGACA GCGGCACGCT CTATGTCGCC
AATCGGGGGC AACCTTTTGC GTCCAGGAAT GTCGACGCGC TCTGCGAAAT GGGTTTGTCG
AGCAAGCCGC CGGGCGAGGC GGTCGGCAAC AAGGGCCTCG GCTTTCGCAG TGTCCGGCAC
GTCAGCGATA TTCCGCAAAT CTATTCGCGC CTGGCTGAGG ACAGTCCGGG CGATCTCTTC
GACGGCTATC GCTTCACCTT CGCCCGCGGC AGCGAACTTG ATCCGCTGCT TCCCGACGAG
GCCACGCGAG CACTCGCGCG CACCGACCTT CCAGCCTTTT ACATCCCTCG CTGGCTGGAC
CAGACGCCGG ATACGGTGAG GGAATTCGCG CGCAAGGGAT TCTCGAGCGT GATCCGATTG
CCGCTGCGCA ACCAGGCTGC CCTCGATGTG GTTCGCGCCG AGATATTGAG CCTGGCCAAG
GCCGAAGCGC CGATGCTGCT GTTCCTGCGC CGAATTGCGA CGCTGCGCGC AGAAATCCAG
GGTGACCGGA TCAAGGAGGA TGCGCTCGAT CTGAAACTCA CCCGGAGCGA GACGCCGCTC
GATGACGCTC AAGGTCCAGC TTTGGTCGAT TTGGGCGAAA ATGGCTCCTT CTGGGTCGCG
CGCGCGGAAA TCCCCGAGGG CGACATGCAG GCCGCGGTTG CAGAGGGCCT TGAAAGTGGC
GCACTGCCAG AGAGCTGGAA CGGGTGGAAA GGCAGCGGCG AAGTGGCCGT CGCCGTCCCG
ATCGGCGAGA CGATGCCGGA CTTTCATCCT CGTCTTTACA CCTTCCTGCC GATGGGTCGC
GGCGCCACGT CTCCCTTCCG CGGCCATTTG CACGGCAGCT TTTTTCCAAG TTCGAACCGG
ACGAGCCTCG ACCCTGCCGT GCGGGTCAAT GCCCTGGTGC TCGATCATGC GGTAAAGCTA
GCGTCTGCGA CGGCGGCCTG GCTGCAGCGA CGTGGCTCCG CGCAAATGGA GGCGAAGGTC
CCGGTTCTCA CCGCTGTGCG GGCAGCTGTC GACCTCTTGC TCTGGAATAC GCCAACGAGC
CTGCTGCAGG GCGAGAGTGA TGGCGAGGAC GAGGAGGCGA TTGACCTCGG CACCGCGATG
ACCGCTGCGA TTGTTCGGCA GTGGGGGGCA TCCTCGCTGG CGGAGGCGGA CTTCGTTCCA
TGCCTGGCCG AATGGGCCGG GGATGCGCTA GCCCGGCCTC CCTTCGGGCC GGTTGCCTTC
ATCAGTCCGG CAGGTTCGCG CCGAGTGCAG GCCGCCGACA CGTCCTTCTC GCTCGACGTG
ATCGCGCGGC ACGGGCAATC CGCGGGCCTC GCCCCCTTCT GGCCGGGACT TGGCGAGCAG
CGGAGCGAGA AGTTGGCGCT GTTTCTGCGC GGCCATGCCG GCGGCCATTT CAAGGATCGC
CTGACTGCCT CGGAGCGGGC CATCATCGTC GAGGGGCTGG CCAAGGCGAT CGCGAGGCCG
CGCAGGCCCG ATTGGGCGCG CTGGACCGCC TTTTATCGCG ACCTGTCCGA CTTCATGGGG
AGCGATGCCT CGGCCCTGGC GGGCAAGACG ATTCTGATTT GCCAGGATGG CTCGCTGCGC
GCGACCCGGT CGCAAGCGCG ACCCGAGCCG TCGTCGGGGG AGACGCACAA GCGCCGCACG
CGCCGTGCGC CGCGCGAAGC TTCGGTGTTC GTGCCGCCAC GGCGCGGCGA CGCCGAGGAC
AGCATCGGCG AGGATTTCTA TCCCCCGGCC CCGCTACGCG AATTCTTCGC CTTCCTGCAC
GACAGACTGC CCTGGTATGG GGAGCTCGCC GCCGCTCGTC AGTTCCTAGA GAAGGATCTG
GCGACGGCAT TCGAAAGCGA GGCGCTGCTC ACCCGCATTT CGCAGATTCT CGAGCGGGAC
GAGACGAAGA AGGTCAGGGC AGCGGGACTG CGCTGGGCCT TCGCCATCTG GCGCCGCTCG
GTAGCGATCA AGCGCGCCGT CACGCTGTCT CCCGCTTATC GCCTCTTCGT GCCGACGATC
GATGGCGAAT TCATCCGCGC GTCGGAGGCG GTCTTCTCCT CGGCCTGGCC AGACCGCACC
TTGGGCTACG ATCTGCAGCA ATTTCTCGAG CTCGCGCCTG CCGGCTCCGC CGATCTAGCC
GAGGTGCGCG CCCGGCGGCT GGCCGCGCCG TCCGCCGCCG TGTTTGGAAC GCGGTTCGTG
GACGACTGGA CGGATTTTCT AATCGGGATT GGAGTGCAGC GAGGCCTCGA GCCGCGGACG
AAGGAGCTTC AGCATTATGT CAGCGCCGGA CGGGTGACGA GCTTCGATTT CCTCAAGGAC
CTCGGGTTCC CTGACAGTTT CGGATCACTG TTGAAAAAGG ACATCGCGAC CCGGCCGGGA
GTTTCGCTCG GGCTGCCTAC ATCGACCGAT TATGATGTCG GGGCGGTGTG GTGGATGCCA
GGGCAAGCAG ATGTCGACGC CTTCAGCGAC GAGGCGCTCG ACGCCTATGC CAAGCTCGTT
CTTGCCTGGA TCGGGCGTGC CACGCACCGG CATCTCTGGA TGCCGGTCAA ACATCGATAC
AATCATCGCT CGGACAATCG CGATTGGCCC ACACCGCTAG CGGCTTTTCT GCGATCCGCC
GCATGGCTGC CCTGCGAAGA GCCGGGCGCC GACGGGCTGA AGCGGTCGCG GCAGGAAGGC
GCCAAGGTCT GGCTTCCGCG CGGAAGTGAT CGCTTCCCGC CGTTCCTTCG CCGCTTGTCT
TATAAGCTCG CCCGGGCGCT GGACCGAACG CCCGACGCGG TCGCCGATAC CCTGCGTAAG
CATGCCGGGC TCAAGACCTT CAATGCGCCC GACACGTTGC TCGAACAGGC AGGCTTTTTG
GCCGAACAAT TTGCCCAAGG CTGCGTCCGG CGGTTTCACG AGCGCGAGCT CGTCAACATC
TATGCACGCT GCTGGGCCCG GCTTGCCGAG AAATATGGGG CGGAAGATGC GACCGTGCCG
CCGGGCAAGC CACCCGCGAC GCTGTTGGTG CGCAGGCGAG GCCAGCTCGG CTTTGCCACA
GTGGCGGCCG GTGCCGCCGA AACGATCTAT GTTCGGGACA GCACGGATCT GATCGCGACG
AGCCTTGTCG AGGTGCTTGG CGATCCGCTG CTCGACGTCC GCGGGGCCGA GCCGGAGCGC
CTGGGCGTGC TCCTTCACAA GCTGTACGGC AACGGTGTGC GGCGAACCTC GCAGCTCGCT
TACGCGATCG AGGTCGATGG ATCGCCTCTC GAAGAGCTTG GCCTGGGCCC CAAGCTGGTA
AGCTGCTGTC CCTGGCTGCG CTTGATGCTC GCCGTGGCGC TCGAGGCCCT CGACAGTGTC
GATCTCAATC GCTTGCCGGC GGACCGTGCT GCCATTCTGC AAACGCTCGA TCGGCTCGAG
CTTCATCAGA CCGCCGCGCT TCGCTTCCTG CTGAACGGCC AGGATGTAAC ACCGCCCACG
GCGCGCGGAG CCTACCAGTT CGAGCGGGCC GAGGGCGAGC CAGTGCTTGT GGTCATGGGA
ACCGGCCCGC TCGACTGGGC CAAGATCGAA GCGGCGTTGC CGGCGATCGG TGAAGCTATC
GGGCATTCGG CGGTTGTGCC GCACATGAAG CTGCTGGCTC GCCAGCTGCT GCTCGACGAT
GTGGCGGTCG ACGAGCAGCC TTCAGGTCAA GAGGACCTGC TGCGTCTGTG CCGCGAGCTG
GAACTCACCG AACAGGCGGG CGAAGCCGCG CGTGACGCGC TTGGCGAAAG ACTGGACCAG
TCGGCGCCCT GGCTTCGCGC AGTGGTCTTC CACCATGGCG GGGAGAACGC GTTCGAGACC
TGGATGCAAG GCGAGGCCGC CGCGCTGGAG CATGCGGGCG CAGCGGCCGA GCAGTTGCGA
TCCCTGTTGC CTGCGGTGAG CAGCGTGGAC GAAATCGTGG CGGCGGCCCG GGCTTCGCTT
TCGGCAGGGG AGCTGCGCGA ACGGCTGGGC CTGGAGTTCG AGAGCTTCAA TGCCAGCCTG
GTTGCGACGG GAAGCGCGCC GGACGTCGAC CCGCAGGGCC AGCAGCAGCA GCTCGACTTC
TATATCGCGG ACAATCGCAT CCTGATCGTC GACGCGCTTC GCAATCTGAC AGCGCCGACG
CTGCTCGCGT TCACGCCCGA TCCGCGCTAC AAGGCGGCCG TCGAAGCCTT GGGCGCCCTC
AAGCCCGATC CCGATTGGCT CCTGCGATAT GAGCGGATAC CCGAGCCGCT CCTGGCCGGT
CATGTGGCGG CATGGTTGGC GGCGACAGGC GCGCCGGCAC TCGGGGAGAA TCCGGAAGGG
CTAGGCGATC TCGCAGCCGT TCGCACCGGC AATGCCACTA TCTTGCGTCA GGTCGCTCGT
ACAGCGCCGC CGCTCGTGCG CGCCTGGGGC GTGCAGCATT CAGTTTCGGT GGGTGATCTG
TGGCGCGACG CCGGGCAAGT GGAGACGGAA CTTCGCCGCC GGCTCGACGA TGCAGGCGCG
TTCGACTGCC GCCTGTGGGA TGAAGCCGAG CTCCTGATAT GGCTGGAGAA GCTCGGCGCC
TGGCCCTCCG GCATGAAGCA CAGCCTTGAT CGCGCTGTGC TCGGCGTTCC TGAAACCGAC
ATTGAAGCGG CGGCGCAAAA GGCGAGGGAG GAGCGGGAGA GACGCAGTCG CGAAGCGCGA
TCGGTGCGGC TCAATGGGAC GCTGCGCGAT CCGCTCGAGG TGGACTGGCT CAGTCTTTCC
GCCGAGCTGG CCGGCAGCCT GTCAAAGAAG CTTCTGAACC GGCCGATCGG CAGCTTTGCA
CAGCTGGCCG CCGGGGGAGG CGGACGCGGC TGGCGCCGGG GATCGGGATC CGGCGGCGGG
GGCGGTGGCG GCGCCTATAG CGGAATACCG CAAGAGAAGA AGGATATGAT CGGCCGGCTG
GGCGAGCTTA CGGTCTATCA CTGGCTGAAG GCTCGGCAAC CTGGTCAGGA TATCGACCGA
TGCTGGGTGT CGGGTAATTC CGGGCCTTTC GTCGGCAAGG AAGGACGGGA CAATCTTGGC
TATGATTTCC GGATCAGCTT CAACAAGCAA GTCTGGTATA TCGAGGTGAA GGCGAGCACC
GAAGATCCTT GCCAGTTCGA GATGGGAGAG ACCGAGGTAC GGTGGGCGCG AGACATTGCC
CGCTCTCGAG CGGCTGACCG CTATGTGATC GCCTATGTGG CCAATGTGGG CCAAACCGGC
GCCACGACCA TCGATATCCT CCCCAATCCG CTCGGCCCTG AGGCTGACGG CGTGGTGAAC
ATCGCGGGGG ATAGCATTCG CTACACTTTC GACCGCCGAC GCTAG
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| Protein sequence | MRRNPGLNAR EKLSPVVAEP EVMTQQLHRA MMSPLRGQVK PHASLPPRCR SPALRVARRM
GNVCGGGKSI ATVSPDRSPA ALSERASPLA ALPPRAHIER IASRKIKGFC GTIDEDGVYY
DPVHKQNQSL SQHIIADYHG RFLIELIQNG HDAHDKARRD GEIAVLLAGD EGDSGTLYVA
NRGQPFASRN VDALCEMGLS SKPPGEAVGN KGLGFRSVRH VSDIPQIYSR LAEDSPGDLF
DGYRFTFARG SELDPLLPDE ATRALARTDL PAFYIPRWLD QTPDTVREFA RKGFSSVIRL
PLRNQAALDV VRAEILSLAK AEAPMLLFLR RIATLRAEIQ GDRIKEDALD LKLTRSETPL
DDAQGPALVD LGENGSFWVA RAEIPEGDMQ AAVAEGLESG ALPESWNGWK GSGEVAVAVP
IGETMPDFHP RLYTFLPMGR GATSPFRGHL HGSFFPSSNR TSLDPAVRVN ALVLDHAVKL
ASATAAWLQR RGSAQMEAKV PVLTAVRAAV DLLLWNTPTS LLQGESDGED EEAIDLGTAM
TAAIVRQWGA SSLAEADFVP CLAEWAGDAL ARPPFGPVAF ISPAGSRRVQ AADTSFSLDV
IARHGQSAGL APFWPGLGEQ RSEKLALFLR GHAGGHFKDR LTASERAIIV EGLAKAIARP
RRPDWARWTA FYRDLSDFMG SDASALAGKT ILICQDGSLR ATRSQARPEP SSGETHKRRT
RRAPREASVF VPPRRGDAED SIGEDFYPPA PLREFFAFLH DRLPWYGELA AARQFLEKDL
ATAFESEALL TRISQILERD ETKKVRAAGL RWAFAIWRRS VAIKRAVTLS PAYRLFVPTI
DGEFIRASEA VFSSAWPDRT LGYDLQQFLE LAPAGSADLA EVRARRLAAP SAAVFGTRFV
DDWTDFLIGI GVQRGLEPRT KELQHYVSAG RVTSFDFLKD LGFPDSFGSL LKKDIATRPG
VSLGLPTSTD YDVGAVWWMP GQADVDAFSD EALDAYAKLV LAWIGRATHR HLWMPVKHRY
NHRSDNRDWP TPLAAFLRSA AWLPCEEPGA DGLKRSRQEG AKVWLPRGSD RFPPFLRRLS
YKLARALDRT PDAVADTLRK HAGLKTFNAP DTLLEQAGFL AEQFAQGCVR RFHERELVNI
YARCWARLAE KYGAEDATVP PGKPPATLLV RRRGQLGFAT VAAGAAETIY VRDSTDLIAT
SLVEVLGDPL LDVRGAEPER LGVLLHKLYG NGVRRTSQLA YAIEVDGSPL EELGLGPKLV
SCCPWLRLML AVALEALDSV DLNRLPADRA AILQTLDRLE LHQTAALRFL LNGQDVTPPT
ARGAYQFERA EGEPVLVVMG TGPLDWAKIE AALPAIGEAI GHSAVVPHMK LLARQLLLDD
VAVDEQPSGQ EDLLRLCREL ELTEQAGEAA RDALGERLDQ SAPWLRAVVF HHGGENAFET
WMQGEAAALE HAGAAAEQLR SLLPAVSSVD EIVAAARASL SAGELRERLG LEFESFNASL
VATGSAPDVD PQGQQQQLDF YIADNRILIV DALRNLTAPT LLAFTPDPRY KAAVEALGAL
KPDPDWLLRY ERIPEPLLAG HVAAWLAATG APALGENPEG LGDLAAVRTG NATILRQVAR
TAPPLVRAWG VQHSVSVGDL WRDAGQVETE LRRRLDDAGA FDCRLWDEAE LLIWLEKLGA
WPSGMKHSLD RAVLGVPETD IEAAAQKARE ERERRSREAR SVRLNGTLRD PLEVDWLSLS
AELAGSLSKK LLNRPIGSFA QLAAGGGGRG WRRGSGSGGG GGGGAYSGIP QEKKDMIGRL
GELTVYHWLK ARQPGQDIDR CWVSGNSGPF VGKEGRDNLG YDFRISFNKQ VWYIEVKAST
EDPCQFEMGE TEVRWARDIA RSRAADRYVI AYVANVGQTG ATTIDILPNP LGPEADGVVN
IAGDSIRYTF DRRR
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