Gene Swit_5325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5325 
Symbol 
ID5195766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp224792 
End bp225073 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content67% 
IMG OID640579252 
ProductXRE family transcriptional regulator 
Protein accessionYP_001260200 
Protein GI148550761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.307634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACATC GGCTGAAAGG CGCGCAAGCA GAGGCGCGCG AGGCGCTGAT AGAGGCGCTG 
CGATCGGCAT TATCCGAACT GGACCTGAGC CAGGTAGCCG CCGCGCGCCT GCTCGAGACC
GACCAGCCGA CCTTGTCCCG ATTGTTGTCC GGTCAGCGCA CGAGCGTCAG TTTGGACCGG
TTGATCCGCT GGTTGGGCCG GCTCGGCCGG ACGGTCGACG TCAAGGTAAA GGTGGCCGCG
CCAGCCGGCG TGCCGCCACG CGCGAGGCGT GCTCATGGCT GA
 
Protein sequence
MEHRLKGAQA EAREALIEAL RSALSELDLS QVAAARLLET DQPTLSRLLS GQRTSVSLDR 
LIRWLGRLGR TVDVKVKVAA PAGVPPRARR AHG