Gene Swit_5314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5314 
Symbol 
ID5195845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp210642 
End bp211655 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID640579241 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_001260189 
Protein GI148550750 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.217481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT TTGGCTATGC GCGGCCAACG TCGATCGCGG ACGCCGTCAG CTTGGCCGCA 
AAGGACGGTG CGCGCTACAT CGCGGGTGGC ACGAACCTGG TCGATCTGAT GAAGGAACAT
GTCGAACGGC CGACGAGCGT GATCGACATT ACCCGGCTGC CTCTGGGTAG GATCGAGGAG
GCTGAGGATG GGGGATTGAG GCTCGGTGCG CTTGTGCCCA ATGCCGACAC CGCCTATGAC
CGGCGCGTCC AGGATCGTTA CCCGCTCCTG TCGTCGGCGA TCCTGGCGGG CGCCAGCCCC
CAGCTGCGCA ATGCCGCGAC CAATGGGGGG AATCTCAACC AGCGCACGCG TTGCTACTAT
TTTTATGACA CGGCGACCGC CTGCAACAAG CGGGTTCCAG GCTCTGGCTG CGGCGCGATC
GGTGGGGTCA ACCGCATCCA TGCCATTCTG GGGGCTGGCG ATCAGTGCAT CGCAACCCAC
CCGTCGGACA TGTGCGTCGC CCTGGCCGCG CTCTCGGCCC AAGTGGAAGT GGCCGGCCCG
AATGGCGTCC GCACGATCGC GTTCGCGGAC TATCATCGCC TGCCCGGCGA GGATCCCGCG
CGCGACAACA GCCTCGAGCG CGGCGAGCTC GTCACGGCCA TCATCCTTCC GCATGAGGAT
TTCACGCAGA ACTACACCTA TCTGAAGTTG CGCGACCGCT TGTCCTACGC CTTCGCGCTC
GTGTCGGTGG CGGCGGCTCT GCGTATCGAG GGCACCAGGA TCGCCGAGGC GCGCCTCGCG
CTTGGCGGCG TGGCGCACAA GCCCTGGCGC CTTCCCCACG TCGAACAGTT GCTGGTCGGC
CGCGAGGCGG GCGAGGCGGT CTTCCGGCAG GTCGCTGACG CGCTGCTCGA CGGTGCGGCC
GGCCAGGGCG AGAACGACTT CAAGATCCCG CTTGCGCGGC GCGCGATCGT GCGGGCGCTG
TCGCAGGCCG CGGCCGGCAC GCCGCAATCG CAAACCGACA AACGCGTCGC CTGA
 
Protein sequence
MNRFGYARPT SIADAVSLAA KDGARYIAGG TNLVDLMKEH VERPTSVIDI TRLPLGRIEE 
AEDGGLRLGA LVPNADTAYD RRVQDRYPLL SSAILAGASP QLRNAATNGG NLNQRTRCYY
FYDTATACNK RVPGSGCGAI GGVNRIHAIL GAGDQCIATH PSDMCVALAA LSAQVEVAGP
NGVRTIAFAD YHRLPGEDPA RDNSLERGEL VTAIILPHED FTQNYTYLKL RDRLSYAFAL
VSVAAALRIE GTRIAEARLA LGGVAHKPWR LPHVEQLLVG REAGEAVFRQ VADALLDGAA
GQGENDFKIP LARRAIVRAL SQAAAGTPQS QTDKRVA