Gene Swit_5289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5289 
Symbol 
ID5195756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp189828 
End bp190097 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content61% 
IMG OID640579216 
Producthypothetical protein 
Protein accessionYP_001260164 
Protein GI148550725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.726061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCT ACTTTTTCGA CATCTACAAT GACGAAACGA CCGAGGATGA TAACGGCATC 
GAACTTGCCG ATAGCGAGGC GGCGCTGAAG CGCGCCCGCG CCGAGGCGCA GAACCTGGCT
GCAGAATCCA TCCGCGAGCA CGGCCATCTC ATCCTCGATC ACCGCATCGT GGTGCGCGAC
GGGAATGGCG CGACGATCGG CGAGGTTCGT TTCGACGAGG CGGTCGAAGT GCGCCAAAGC
GGCGGCAAGA GCGAGCCTCG ACGATCATAA
 
Protein sequence
MPLYFFDIYN DETTEDDNGI ELADSEAALK RARAEAQNLA AESIREHGHL ILDHRIVVRD 
GNGATIGEVR FDEAVEVRQS GGKSEPRRS