| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5253 |
|---|
| Symbol | |
|---|
| ID | 5195624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 143734 |
|---|
| End bp | 144699 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579180 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260128 |
|---|
| Protein GI | 148550689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTGCG TCCCCAATGA CGCGGCACCT TGCCGCGTGC CCGACAGGAT CGACCTCCAT
CCGCGGGCGC CCGTCATCCT CGCCTACGGC ATCGGGGTCG ATTCCACCGC GCTCCTCATC
GAGCTGCATG CGCGCGGCGA AACGCCCGAT CTCGTCCTCA CCGCAGACCC GGGCGCCGAA
AAGCCCGATA CCTATGAATA TCAGACGATG ATGGCCGCCT GGATGGCGAG CAGGGGCATT
CCCTACGAAG TCGTCGCTTA CCGGCCCAAG CGCTTCAAGC ACTATCCGCC CTATGCGACC
ATCCTTACCA ACCTGCTGGC GAACGCGACG CTGCCGAGCA TTAGCCTGGG CCGTCACAGC
TGCTCGCTCA AATGGAAGGT CGCGCCCCAG GACGCCTTCC TCAAGCAATG GCCGCCGGCC
AAGGCTGCCT GGGCGGCGGG CCGGAAGGTC GTGCGCCTGA TCGGCTACGA TGCCTCGCCC
GCCGACGCGC GCCGCTACCG CCATGCCGCC GGGATCGACG ACCCGCTGTT CGAGTGCCGC
TATCCGCTTC GCGACTGGGG CTGGACGCGC GCACGCTGCG AGGCCCGGAT TGCGCAAGCC
GGCCTGCCGG TCCCGCCCAA GTCGTCCTGC TTCTTCTGCG GCGCCATCGA GCCCGACGAG
GTCCGCGCCT TGCCGGCCTG GTGCCTGCGC CTCATCGTGC TCATCGAGGC ACGCGCGGCC
CCGCGTCTCC ACACGGTCGA GGGGCTCTGG CGGCGCTCGA CCCGAACCCG TCCAGGGCGG
ATCACCGACT TTATCCGCGC CGAGAAGCTG CTGCCCCAGG CCGAGATCAG CGAGATCCTG
CGGACCGCTC CCACCGACCT GCTGCGCTTC CAGGACGCGG CCGCGCTCGT GCCGGTGAGT
GAACGACCGA CCATGGAGCA ATGGCTCGCC GACTTCACCG CGGGGCAGGC CACCAGCCGT
CTCTAG
|
|---|
| Protein sequence | MHCVPNDAAP CRVPDRIDLH PRAPVILAYG IGVDSTALLI ELHARGETPD LVLTADPGAE
KPDTYEYQTM MAAWMASRGI PYEVVAYRPK RFKHYPPYAT ILTNLLANAT LPSISLGRHS
CSLKWKVAPQ DAFLKQWPPA KAAWAAGRKV VRLIGYDASP ADARRYRHAA GIDDPLFECR
YPLRDWGWTR ARCEARIAQA GLPVPPKSSC FFCGAIEPDE VRALPAWCLR LIVLIEARAA
PRLHTVEGLW RRSTRTRPGR ITDFIRAEKL LPQAEISEIL RTAPTDLLRF QDAAALVPVS
ERPTMEQWLA DFTAGQATSR L
|
|---|
| |