Gene Swit_5231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5231 
Symbol 
ID5195800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp123734 
End bp124186 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content54% 
IMG OID640579159 
Productlimonene-1,2-epoxide hydrolase 
Protein accessionYP_001260107 
Protein GI148550668 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4308] Limonene-1,2-epoxide hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.143901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.486907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGGA AGCGGTCAGC TTCTCGCTAT TCGCTATTGA CGGTTTGCGC TGAAAAATGG 
GGGAGAGAGA ATATGGCTTC GCCTGGCGAG ACTGTGACGG CATTCCTTGC GCAATGCGGG
AACGGCAAAA ACGAGATGAT GGATGCCTTT CGCACGTACT TCACGGCTGA CACGATCTGG
GAACTGGTCG GATCGATAAC GACCAAGGGT ATCGACGAAG CGCTGGCCAA AGTTCAATCG
GCTCAGACCG AATACGGGAT GGATCATCTT GTTTCGGAAG TCCGCGCTCT TGCTACGCAA
GGCCAATCAG TTCTGACGGA GAGGATCGAT CATGTCCGCA AGGCGGATGG AACAAACATC
GATTCCTGCC CCTGTATGGG CATTTTTGAG GTCGAAGCCG GGAAGATCAC CGCGTGGCGA
GAATATTACG ATACGGCAAC GCACGGCACG TGA
 
Protein sequence
MLGKRSASRY SLLTVCAEKW GRENMASPGE TVTAFLAQCG NGKNEMMDAF RTYFTADTIW 
ELVGSITTKG IDEALAKVQS AQTEYGMDHL VSEVRALATQ GQSVLTERID HVRKADGTNI
DSCPCMGIFE VEAGKITAWR EYYDTATHGT