| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5216 |
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| Symbol | |
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| ID | 5195634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 106968 |
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| End bp | 108230 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640579144 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001260092 |
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| Protein GI | 148550653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.939418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.517526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA TCGAAACCTT CGTTTTCGTC TATTTGGACG GCGTTGCCGT CCCTGCGGGC
CTTTTGCGCC TCCACAGCGA GCCGCGTGCC AGCTACGCGA CCTTCGCATA CGGCAATCGC
TATCTCGAGC GGCCCGACCG TGTCGCGATC GATCCTGTGA CCCTGCCGCT GCCGCCGGCC
GGCACGCGCC AGGAATTCCG GACCGAGGAA GGCTTTGCCG TCTTCAATGG GATCCGCGAC
GCCGCGCCCG ACGGGTGGGG TCAGTATCTC ATGTACAAGG CGATGGGCGA GCGAACGCCA
AGCGAGGCGG ATCTCCTGCT CGCGTCCGGT GACCACCGCG TCGGCGCACT GGCGTTCGGT
CCCACGCTAG AGGCGCCAAG GCGCCTCGCG CCCTGGGGCG AAGCCGACGC GCCCGGCGAA
CAGTTCACCC TGGCAGAACT GGCCGCCGCC GCCGAAGAAG CGCAGGAGGT CGACCAGCTC
AGCGAAAATC TGCGCCCCCT CTTGACCGCC GGCTCGTCGC TGGGCGGTGC GCGTCCCAAG
GCGGCGACGA CGATCGAGGG CCAATCCTGG ATCGCCAAGT TTCCAGCACG CAACGACACC
TTTCCCGAGT GCCGGGTCGA GCTAGCCACC ATGCGGCTCG CCGCTGAATG CGGGCTCGAC
GTTCCGTCGC TTCGCTTCGA GCAACTGCTC GGCCGCGACA TCTATCTGAT CGAACGTTTC
GATCGCAGGC TGGACGGCAA CCGGATGCTG CGCACCTCCT TCGCATCGGG GCTTACGATG
CTGGGCGCGC ATGAAAGCGA GGTCAGCCGC TATGCCTATG CCGATCTGGG CGCGACGCTA
CGCCAGCACG GCACTGCGGT CCGGCGGGAT CTCGAGGAAC TGTTCAGGCG CATGGTCTTC
AATATCCTCG TCACCAATGA CGACGATCAC CTGCGCAATC ATGGTTTCCT GTGGGACGGG
AAGGGGTGGC GGCTGTCGCC GCTCTATGAC GTCGTTCCCA AGCCGCAGGT GGGCCTGGAT
CGCCGGCTCG TGCTGGGCGT GGGGGCCGAG GGTCGCCAGG CCAGCCTTGC CAACGCGCTC
TCGCAGGTCG CGCAGTTCGA CCTGGGGGAG GAGGATGCGC GCGCGATCGT TATCGCTATG
GCCGATAGGG TTCATGCGCG GTGGCGTGCC TGTTTCGAAG AGGCAGGGGT CAACGTCGCC
GACCAGGGCC GTTTTGCTAC CTGCTTTCGC CTGGCGGACC CCGAACATCG CGCAATCGGC
TGA
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| Protein sequence | MADIETFVFV YLDGVAVPAG LLRLHSEPRA SYATFAYGNR YLERPDRVAI DPVTLPLPPA
GTRQEFRTEE GFAVFNGIRD AAPDGWGQYL MYKAMGERTP SEADLLLASG DHRVGALAFG
PTLEAPRRLA PWGEADAPGE QFTLAELAAA AEEAQEVDQL SENLRPLLTA GSSLGGARPK
AATTIEGQSW IAKFPARNDT FPECRVELAT MRLAAECGLD VPSLRFEQLL GRDIYLIERF
DRRLDGNRML RTSFASGLTM LGAHESEVSR YAYADLGATL RQHGTAVRRD LEELFRRMVF
NILVTNDDDH LRNHGFLWDG KGWRLSPLYD VVPKPQVGLD RRLVLGVGAE GRQASLANAL
SQVAQFDLGE EDARAIVIAM ADRVHARWRA CFEEAGVNVA DQGRFATCFR LADPEHRAIG
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