Gene Swit_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5186 
Symbol 
ID5195805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp75317 
End bp75781 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID640579116 
Producthypothetical protein 
Protein accessionYP_001260064 
Protein GI148550625 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.093904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG GTTCGATCAA GCAGAATGAC GCCGGCATTT TCGTCGGCAA GATCGCGACG 
CTGGCGATCG CGATGACGAT TGCGCTGCGC GAGGTGCACT CGGCCAATCC GAAGGCGCCG
AAGTACGAGG TGCTGGCGCT GTCGGCATCG CGGGCGTGGG TGCAGGTGGG TGCTCTGTTC
GAGCTTGCCT CCAACAGCAC CGGCGAGGCG TTCCTCAACG GCAAGATCGA GGATCCGAGC
CTGGCCGCGC CGCTCTACGT GTCGGCGTTC CGTCAGGAGG ACGGCAGCTA CAACGTCGTG
TGGTCGCGCC CGACGCGCCG CCGCGACCTC GCCTCGGAGA TGGCGCCCAA GGCCGACGAG
GGCCTGCCGC CGCTGCCCGG TGCCGACGAG ACCGCCGGCC CCGCCACACA GGGCACCGAA
GCCGGCCTCG GACAGTCCTC CGCAAGCCAT GCCTTCGCTG GCTGA
 
Protein sequence
MNIGSIKQND AGIFVGKIAT LAIAMTIALR EVHSANPKAP KYEVLALSAS RAWVQVGALF 
ELASNSTGEA FLNGKIEDPS LAAPLYVSAF RQEDGSYNVV WSRPTRRRDL ASEMAPKADE
GLPPLPGADE TAGPATQGTE AGLGQSSASH AFAG