Gene Swit_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5116 
Symbol 
ID5195799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp2413 
End bp3042 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content70% 
IMG OID640579046 
Productphosphoglycerate mutase 
Protein accessionYP_001259994 
Protein GI148550555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.156451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA TGCGGGCGAT CTTCATCCGC CACGGCGAAT CCACCGGCAA CGCCGGCGTG 
CCGTGCCATG ATCTCGCGGC GATCGAGCTG ACGGAGCGCG GCCACGAACA AGCGCGCCAG
GTCGCGGCGA GCTGGACGCA AGCGCCCGCG CTCATCGTCA CGTCGCCCTA TACCCGCACC
CGGCAGACGG CCGCGCCGAC GATAGCGCGC TTTCCTGGCG TGCCGGTCGA AGTGTGGCCG
ATCGAAGAAT TTACCTATCT GCAACCGGCG CGCTGGAACG GCACGCGCAG CGCCGAACGG
ATGCCGCACC TCGAACGCTA TTGGAGCGCG GCCGATCCGG ACTATTGCGA CGGGGAAGGG
GCGGAGAGTT TCCGCGCCTT GCTCGGGCGC TGCGAGGCGG CGCTGGCCCG CCTCGCGGCC
ATGCCGCCCG CTTCGCTCGT CTATGTGTTC GGACATGGGC AGTTCATCCA GGCCGCGCGC
GCGATCGTCG CCGACGCCGA TCTGGACGAG CGCGCCAAGA TGCGCGCCTT CTGGCGCAAG
GGCGAGCCGC CCGCGATCAG CAACGCGCAG CGGCTAGGGT TTCATTGGGA TGGCGACCGC
TGGGCGTGTG CGCCGGCGAT CGCCGCCTAG
 
Protein sequence
MTHMRAIFIR HGESTGNAGV PCHDLAAIEL TERGHEQARQ VAASWTQAPA LIVTSPYTRT 
RQTAAPTIAR FPGVPVEVWP IEEFTYLQPA RWNGTRSAER MPHLERYWSA ADPDYCDGEG
AESFRALLGR CEAALARLAA MPPASLVYVF GHGQFIQAAR AIVADADLDE RAKMRAFWRK
GEPPAISNAQ RLGFHWDGDR WACAPAIAA