Gene Swit_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5104 
Symbol 
ID5195973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp214552 
End bp215280 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID640579530 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260478 
Protein GI148551048 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.34332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGGC ATGAGATGAT CGACGCCATG CGCAGCCTCG GCCTCAAGGG CATGGCGGGT 
GCGTTCGACG AGGCGGTCAC CACAGGCGTT CAGCGTAAGC GCACCGCGAT GGAGATCCTG
AGCGATCTGT TGCGCGCCGA GGGCGCGCAT CGCCATGCCG CCTCGATCCG CTACCGCATG
AGCGCTGCCA GGCTGCCGGT CGTTAAGGAC CTCGACGCGT TCGTGTTCGA GAACACCCCG
ATCAACGAGG GGCTGGTACG CTCGCTTCAT GCAGGCTCGT TCCTTCCGGG GCGCCGTAAC
ATCGTGCTGG TCGGGGGCAC GGGCACCGGC AAGACCCACC TCGCCAGCGC GATCGCCGCC
AGCGTCATCC GCGCCGGTGC CCGCGGTCGC TACTTCAACA CCGTCGATCT GGTAACGCAG
CTCGAGGAAG AGACGCGGAT CGGCAAGGCC GGCGCGCTCG CCGCCCAGCT GCGCCGCCAC
GAGCTCGTGG TGCTCGACGA GCTTGGCTAC CTGCCGTTCG CACGCTCGGG TGGCCAGTTG
CTGTTCCACC TGATCAGCAA GCTCTACGAG CAGACCTCGG TGATCATCAC CACCAACCTG
ACGTTCGGCG AATGGCCCAG CGTGTTCGGC GACCCCAAGA TGACGACTGC GCTCCTCGAC
CGCATCACCC ACCACTGCGA CATCGTCGAG ACCGGCAACG ACAGCTGGCG CTTCAAGAAC
CGCAGCTGA
 
Protein sequence
MQRHEMIDAM RSLGLKGMAG AFDEAVTTGV QRKRTAMEIL SDLLRAEGAH RHAASIRYRM 
SAARLPVVKD LDAFVFENTP INEGLVRSLH AGSFLPGRRN IVLVGGTGTG KTHLASAIAA
SVIRAGARGR YFNTVDLVTQ LEEETRIGKA GALAAQLRRH ELVVLDELGY LPFARSGGQL
LFHLISKLYE QTSVIITTNL TFGEWPSVFG DPKMTTALLD RITHHCDIVE TGNDSWRFKN
RS