Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5104 |
Symbol | |
ID | 5195973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 214552 |
End bp | 215280 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579530 |
Product | IstB ATP binding domain-containing protein |
Protein accession | YP_001260478 |
Protein GI | 148551048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.34332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCGGC ATGAGATGAT CGACGCCATG CGCAGCCTCG GCCTCAAGGG CATGGCGGGT GCGTTCGACG AGGCGGTCAC CACAGGCGTT CAGCGTAAGC GCACCGCGAT GGAGATCCTG AGCGATCTGT TGCGCGCCGA GGGCGCGCAT CGCCATGCCG CCTCGATCCG CTACCGCATG AGCGCTGCCA GGCTGCCGGT CGTTAAGGAC CTCGACGCGT TCGTGTTCGA GAACACCCCG ATCAACGAGG GGCTGGTACG CTCGCTTCAT GCAGGCTCGT TCCTTCCGGG GCGCCGTAAC ATCGTGCTGG TCGGGGGCAC GGGCACCGGC AAGACCCACC TCGCCAGCGC GATCGCCGCC AGCGTCATCC GCGCCGGTGC CCGCGGTCGC TACTTCAACA CCGTCGATCT GGTAACGCAG CTCGAGGAAG AGACGCGGAT CGGCAAGGCC GGCGCGCTCG CCGCCCAGCT GCGCCGCCAC GAGCTCGTGG TGCTCGACGA GCTTGGCTAC CTGCCGTTCG CACGCTCGGG TGGCCAGTTG CTGTTCCACC TGATCAGCAA GCTCTACGAG CAGACCTCGG TGATCATCAC CACCAACCTG ACGTTCGGCG AATGGCCCAG CGTGTTCGGC GACCCCAAGA TGACGACTGC GCTCCTCGAC CGCATCACCC ACCACTGCGA CATCGTCGAG ACCGGCAACG ACAGCTGGCG CTTCAAGAAC CGCAGCTGA
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Protein sequence | MQRHEMIDAM RSLGLKGMAG AFDEAVTTGV QRKRTAMEIL SDLLRAEGAH RHAASIRYRM SAARLPVVKD LDAFVFENTP INEGLVRSLH AGSFLPGRRN IVLVGGTGTG KTHLASAIAA SVIRAGARGR YFNTVDLVTQ LEEETRIGKA GALAAQLRRH ELVVLDELGY LPFARSGGQL LFHLISKLYE QTSVIITTNL TFGEWPSVFG DPKMTTALLD RITHHCDIVE TGNDSWRFKN RS
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