| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5078 |
|---|
| Symbol | |
|---|
| ID | 5195976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 194381 |
|---|
| End bp | 195220 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640579509 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_001260457 |
|---|
| Protein GI | 148551027 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCG CCGTTTCGTC CCTTCCGAAC AACGTGGAAG CGCTTCAGGC GCTGCTCGCG
ATGGCGACCC ACAGGGCGGA TGAGGCGGAG GCCGCCCTGG CCAACGCCCG CGCCCGCGAG
ACCGCAGTCG AGGCGATGAT TGCGCATCTC AAGCTGCAGA ATGCCAGGCT GCGGCGCGAG
CAGTACGGCG CCAGCGCCGA ACGCACCGAG CGGCTGCTCG CACAGTTCGA GCTTGAGCTT
GAGGATCTCG AAGCCGACGC GGCCGAAGAC GAACTCGCCG CCGAAGCCGC TGCAGCCAAG
ATGACCACCG TCGTCGCGTT CGAGCGCAAC AAGCCCGTCA GGAAGCCCTT CCCCGATCAC
CTCCCGCGTG AACGTGTCGT CGTCTCCACG CCGTGCTCGT GCCCGGCCTG CGGTAGCAAC
CGGCTTTCCA GGCTCGGCGA GGATGTGACC GAGACGCTGG AAGTGATCCC GCGCTCGTGG
AAGGTGATCC AGACCGTGCG TGAGAAGTTC GCCTGCCGGG ACTGCGAGAA GATCACGCAG
CCGCCAGCCC CGTTCCACGT CACTCCGCGC GGTTGGGCTG GCCCCAGCTT CCTCGCCATG
CTGCTGTTCG ACAAGTACGG CCAGCATCAG CCGCTCCACC GGCAGGCCGA GCGCTTTGCC
AGCGAAGGCG TGCCGCTCAG CGTATCGACG CTCACCGACC AGATCGGCGC TGTCCGTCGT
CAGAACATTC GGCACAACTC TCGGCGTAGA TTAGCGGAGT GCGGGCCTCG TCTGGGGGTT
GATGTTAGTC GGCGAGCTTG CGGTGTTGCA AGCGCCGATG TTCGAAGGTC TGTCGCTTGA
|
|---|
| Protein sequence | MEAAVSSLPN NVEALQALLA MATHRADEAE AALANARARE TAVEAMIAHL KLQNARLRRE
QYGASAERTE RLLAQFELEL EDLEADAAED ELAAEAAAAK MTTVVAFERN KPVRKPFPDH
LPRERVVVST PCSCPACGSN RLSRLGEDVT ETLEVIPRSW KVIQTVREKF ACRDCEKITQ
PPAPFHVTPR GWAGPSFLAM LLFDKYGQHQ PLHRQAERFA SEGVPLSVST LTDQIGAVRR
QNIRHNSRRR LAECGPRLGV DVSRRACGVA SADVRRSVA
|
|---|
| |