| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5008 |
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| Symbol | |
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| ID | 5195889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 126738 |
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| End bp | 127073 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579443 |
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| Product | type IV secretory pathway, VirB3 family protein |
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| Protein accession | YP_001260391 |
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| Protein GI | 148550961 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3702] Type IV secretory pathway, VirB3 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 0.118647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.169253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG AAAAGCTTAG GGAAGAAACG CTCTTCCTGG CCGTGACCCG GCCGACGATG
TGGCTGGGCG TTCCGATCGA AGCGTCGCTG CCGATCGCGC TGGCGGCGTG CCTGACGCTC
ATCATCACAG GCAACCCGCT TTACGCCTTC GCCCTAGCCG GAGCAATTTT GGCTATAGCC
CGGCTGATCG TGCGGCACGA TGCGAACGCT TTCCGCCTCC TGTGGCTCTG GACCATGACA
AAGGCACGCT GCCGCAATCG GGGATGGTGG GGCGGGAGTT CCTACTCGCC CCTGCCGATC
GATGGGGCAA AACGCCGGGG CTTTGCGCAT GGCTAG
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| Protein sequence | MDDEKLREET LFLAVTRPTM WLGVPIEASL PIALAACLTL IITGNPLYAF ALAGAILAIA
RLIVRHDANA FRLLWLWTMT KARCRNRGWW GGSSYSPLPI DGAKRRGFAH G
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