Gene Swit_4991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4991 
Symbol 
ID5195891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp103386 
End bp104537 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content51% 
IMG OID640579426 
Productcarbamoyltransferase 
Protein accessionYP_001260374 
Protein GI148550944 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCCGG AACCCGGCCA TCGCTACGCC ATGCTCTACG CACTCGCGGA TCCAACTTTC 
GACATGCGCA CTGCCGAATT TTCCCGGCTG TCCGATGCCG GCAAACTGAT GGCGCTCGCC
TCATTCTCGC AAAGAAGCAA GGCGACCGAC GAAGAAGAGA TGATTGCATC CTTCCTCCTG
CAAAATTGCA AGCACCTGAG GCCGCAAGAT TGCGAGGTCT TCAAAGATTC ACGTTACTAT
AATGTCGGTG TCGAGGATGA CGAGTTTCGT AATTTTGCCG GGATATTCAG CGATCGCCTG
TTCGAACGCT TTTCTCAGTT CGCGGAAAAG AACCTGAGGC GAGGAATGCC GCTGCTTATA
TCGGGCGGAT GCGGGCTCAA CTGCGACTGG AACATTAAAT GGAAGGAATC AGGACTATTC
AGCGAGGTGT TTGTGCCGCC AGTAGCTAAC GATTCGGGTT CTGCGATCGG CACGGCCATC
GATGCCCAAT TCCATTTCAC AGGCAATCCA AAGATTTCGT GGGACGTCTA TTCCGGATCG
ACCTTTCTAC ACAACGAACC TGTCGACAGC GCACTTTTTG ACCAATCGGA AGCGAGCCTC
GAGGCAGTTG CCGCATTGTT GGCCGACGGC CTGATATTGG GTTGGGTCAG CGGTCGGTAC
GAAATTGGAC CACGCGCTCT TGGAAATCGC TCCATCCTCG CTGCACCCTT CAAGGCCAGC
ACCAGAGAAC GGCTGAATGT CATCAAACAG AGGGAACAGT TTCGCCCTAT CGCTCCTGTC
TGTCTTGAAG ATGAAGCTGA AAGATGGTTC GGATGCAGTC ATCCAAGCCC ATTTATGCTC
TATACGTATC GCGCTTTGAC GAATGAACTT GCAGCAGTAA CCCATGTGAA CCAAACAGCG
CGGCTGCAAA CGGTATCCGC ATCGAGCAAT CGTCCGATGT TCGATCTTTT AACGGCGTTC
AAATCGAAGA CGGGCTGTGG AGTGCTATGC AACACTTCCC TAAACTTCAA ACATAAGGGA
TTTGTCAACA CAGCCTCCGA TCTTTCGGAA TACACATTAG CGCATCAACT TGACGGATTT
GTGATAGATG GACGTTTATA CCTCCTGCGG ACGTCAGAAA ATTATCAAAA GTTCAAACGC
CACCTTCCAT GA
 
Protein sequence
MMPEPGHRYA MLYALADPTF DMRTAEFSRL SDAGKLMALA SFSQRSKATD EEEMIASFLL 
QNCKHLRPQD CEVFKDSRYY NVGVEDDEFR NFAGIFSDRL FERFSQFAEK NLRRGMPLLI
SGGCGLNCDW NIKWKESGLF SEVFVPPVAN DSGSAIGTAI DAQFHFTGNP KISWDVYSGS
TFLHNEPVDS ALFDQSEASL EAVAALLADG LILGWVSGRY EIGPRALGNR SILAAPFKAS
TRERLNVIKQ REQFRPIAPV CLEDEAERWF GCSHPSPFML YTYRALTNEL AAVTHVNQTA
RLQTVSASSN RPMFDLLTAF KSKTGCGVLC NTSLNFKHKG FVNTASDLSE YTLAHQLDGF
VIDGRLYLLR TSENYQKFKR HLP