Gene Swit_4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4989 
Symbol 
ID5195993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp101976 
End bp102347 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID640579424 
Producthypothetical protein 
Protein accessionYP_001260372 
Protein GI148550942 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGATAC TCTCCTACAA CCCCGGTCAT GACGGCGCGT TTGCCTACAT CGAAGACGGG 
CGCCTCGCGT TCTCCATCGA GGCCGAAAAG GGTTCGAGGT TTCGGCATTC GTCACTCTCT
GTTCCCGACG CATTCGACGC ACTTGCCGAA CTTCCCGCTG CTCCCGACGT GCTGTGCAAA
GGCGGCTGGT GGCCTGGAGA CGCACCGCGC GACGGAGAAC TGATGGCTGA CTATCGCGGC
AGCGATCCTG ATCAGGTAAT CTTCGGCAAG CGGGCTTTCT TGGGAAGGAC CATTGATTTC
TTCTCGTCGT CACATGAGCG ATCGCACCTT CTTTGCGCGT TCGGGATGTC TGAGAGCCCG
ATCCGAAACT AA
 
Protein sequence
MRILSYNPGH DGAFAYIEDG RLAFSIEAEK GSRFRHSSLS VPDAFDALAE LPAAPDVLCK 
GGWWPGDAPR DGELMADYRG SDPDQVIFGK RAFLGRTIDF FSSSHERSHL LCAFGMSESP
IRN