| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4971 |
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| Symbol | |
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| ID | 5196055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 78457 |
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| End bp | 80175 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579407 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001260355 |
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| Protein GI | 148550925 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG GAGTAGACGG CCAGACCTTC GACGGCATGA CGCTGGCGAG GCTGGATCGT
CTGACCCAAG GCGTGGCGGA AGGCCGTTAC CGCCCTCGTC CAGTGCGGCG GGTCTATATC
CCCAAGGGTA ATGGTAAAAT GCGCCCATTG GGCATTCCTA CGGCGGATGA TCGCATCGTT
CAGGAGGCGG CGAGAATGAT CCTCGCGGCG ATCTATGAGC CTGTGTTCTC GAAACACAGT
CATGGGTTTC GCGCGGGTCG CTCCTGCCAC ACGGCTCTCG AAGAGATCCG CAGAACCTGG
ACGGGCGCGA AATGGCTGAT CGAAGTGGAT GTTCGCGGGT TCTTCGACAA CATCGACCAT
GATATCCTGC TCAGCCTATT GGCCCGCCGG ATCGATGATC CTGTGTTCAT TGATCTGATC
GGGACGATGC TCAAGGCCGG GTGCATGGAC GAATGGAAGT TCGAGCGGAC CTATAGCGGC
ACTCCACAGG GCGGGGTCAT CTCGCCCTTG CTTGCCAACA TCTATCTTCA TGAGCTTGAC
TTGTTCATGG AGGAAATGCG GGCTCGCTTC GACAAGGGCG TCAAACGGCG GGCCAATCCC
GTATATGTTG TCCAAAGCCA GAAAATCGCC GCACTTCGCA AGGAGATCGA TGCAATCCGT
GCCGTTGGCG CGGATGAGGC AGAGGTCCGA ACCCGTCTTG CTCGGATCGA AGCCATCAAT
CGGGATCGAC GGAAGATATC ATCCGTTGAT CAAATGGACC CCAACTTCCG CCGCCTGCGC
TATTGCCGTT ATGCCGATGA CTTCCTCGTC GGCGTGATCG GCAGCAAGGC GGATGCCGTT
CGGATCATGG CCGACATACA GCACTTCCTC GCTGATCGGC TCAATCTGAC GGTATCACCG
GAGAAAACCG GGGTTCGCGA TGCATCGAGG GGATCGCCGT TCCTTGGCTT CCACGTATGC
GCCTTCACGC TGCGCTCTCC CGGAACAATG GCGGGGCGAC AGGCGGTCGG CGGCGGGATG
CGACGCATCC TTCGTCGGCC AACGCGGGGG AATATCAAGC TGTGGGTGCC GAGGGATCGG
GTCTATGCGT TCTGCAGGCG CAAAAAGCTC GGCAACCTCG ACATGAGGAA TGGCCGGGTG
CGTCCGCAAC TCATGGAATC CAGTTTGGCG GAGATTATCG TTGCCTATAA CTCAGAGTTC
CGGGGCTTCG CGAACTATTA TGCGATCGCC GATGGCGTGA AAGCGTCACT CGACAAGTTG
GAGCTGGTCA TGCTCAGGAG CCTCTTTGCG ACTGTAGCAT GCCGGCGACG CTCGACGAGG
CGGCAGGCCG AGGAATATCT GAAGATGGGG TCGGATCACG GTGTTATCAC CGTGGTTCGG
GGCGAGCCGC GCGTCCATAA GGTGTGGAAA CTGAAGCATC TGATCGTGAA GACGTGGGAT
AACCCCCTCG TCGACTCCAT CACGGTAGGC TCTCGCCTTG CGCAGAGCCC GAACGATCTG
GTCACGCGCC TGAGTGCCGA GCAATGCGAG GCATGCGGCG ACACCGATGG TCCGTTCGAG
ATGCATCATC CCAATCGCCT GAAAGATAAG CGACGCGACC AACTGACGCC TTGGGTACAA
TCGGCACGAC GGCGCAGGAC AGTCGTCCTG TGCCACAAGT GTCATGTTGC GCATCACGGT
GGCCGGATGC CTGTCAGAAT GGAGAGCCGT GTGCATTGA
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| Protein sequence | MTPGVDGQTF DGMTLARLDR LTQGVAEGRY RPRPVRRVYI PKGNGKMRPL GIPTADDRIV
QEAARMILAA IYEPVFSKHS HGFRAGRSCH TALEEIRRTW TGAKWLIEVD VRGFFDNIDH
DILLSLLARR IDDPVFIDLI GTMLKAGCMD EWKFERTYSG TPQGGVISPL LANIYLHELD
LFMEEMRARF DKGVKRRANP VYVVQSQKIA ALRKEIDAIR AVGADEAEVR TRLARIEAIN
RDRRKISSVD QMDPNFRRLR YCRYADDFLV GVIGSKADAV RIMADIQHFL ADRLNLTVSP
EKTGVRDASR GSPFLGFHVC AFTLRSPGTM AGRQAVGGGM RRILRRPTRG NIKLWVPRDR
VYAFCRRKKL GNLDMRNGRV RPQLMESSLA EIIVAYNSEF RGFANYYAIA DGVKASLDKL
ELVMLRSLFA TVACRRRSTR RQAEEYLKMG SDHGVITVVR GEPRVHKVWK LKHLIVKTWD
NPLVDSITVG SRLAQSPNDL VTRLSAEQCE ACGDTDGPFE MHHPNRLKDK RRDQLTPWVQ
SARRRRTVVL CHKCHVAHHG GRMPVRMESR VH
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