Gene Swit_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4967 
Symbol 
ID5196050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp76285 
End bp76764 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content61% 
IMG OID640579403 
ProductRES 
Protein accessionYP_001260351 
Protein GI148550921 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value0.928645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.913014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC AGATCACCGA CCGCGTGCTG ACCTGTTTTC GGATCGGCGA TCCCGATGGC 
GCGCATCCCA TCTATGACAG CGAAGGCGCT CGGCTCTATC CGGGACGGTG GAACACCGCG
GCCAGCCCGA TCATCTACAC GTCAGAACAT TATTCGACGG CGATGCTCGA AAAGCTCGTC
CACGCGAACA CGGTGATGCC GCCCAACCAG CATTATATCC GCATCACGAT CCCCAACGGC
GTCAGCTATG AAGTCTTCCC GACCGCCAAA TTCTCCGGGT GGGACGGCAA GCGCGAAGAC
ATCTGCAAGG CCTTTGGCGA GGCGTGGTTC GCGGCAGGGC GCTCGGCGCT GTTGCTGGTG
CCTTCGATCC CGGCACGGGT GGAACGCAAC ATCCTCATCA ATCCAGCACA TCCCGACGCG
CAAACAATCA GCTTCGATCT GCCCGAACCA ATATGGTGGG ATGACCGGCT CTACGGCTGA
 
Protein sequence
MSAQITDRVL TCFRIGDPDG AHPIYDSEGA RLYPGRWNTA ASPIIYTSEH YSTAMLEKLV 
HANTVMPPNQ HYIRITIPNG VSYEVFPTAK FSGWDGKRED ICKAFGEAWF AAGRSALLLV
PSIPARVERN ILINPAHPDA QTISFDLPEP IWWDDRLYG