| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4956 |
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| Symbol | |
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| ID | 5196044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 63589 |
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| End bp | 64893 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579392 |
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| Product | plasmid encoded RepA protein |
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| Protein accession | YP_001260340 |
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| Protein GI | 148550910 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGGG ATCAGCATAA GCCGCTAGGG CACCAGTACG CATTAGCCAT GCTCACCGGC
GGAGAAGAAG GCGTGCGTAA GCTCGCCACT TCCGCTGGCA CCCAGCTAAC AATCGACGCC
TTTCTCCGCG TTCAGGACGA GGAGCCTGTA CCAGCGTTCC TCCATTCCGC GCTTTGCGCA
ATGTCGCTGC CAACGAAGCG GCCCAAGGAC GACACCCAGC CGATCGTTCG GGAAGACGGC
AAATACGCGC TCGCTATCAA TCCGAGGCCC GTGCTCCAAA ACATTGATGG CAAGTCGGTC
ATGCGCAGCC TCGGCGTACC CTATGGCGCT TATCCTCGCG TCGCCTTGAT CTACCTCTTG
TCGCAAGCGG TCATGAAGCA GTCGCGCGAC GTTTATCTCG GCAGAAACTT CACCGAATGG
ATGCGTCGCC TAGGCTACCA AACCGTATCA TATGGTCCAC GCGGTACGGC AAACCTCATG
CGGGAGCAGG TCGATCGGCT GCTGGCGTGC GAATGGCAGA TCCGCTGGGA CGGGACCGAA
GCCGACGGTA ATGCTTTTGC GGTGCGGGAC GTCAAAATCT CCAACGAATA TGCCGGGTCA
CTCGACAAGA ATGGCTCTTT TGCTCGCGAA ATCCGCATGT CGGAAGCGTT CTACAGCCAT
CTCATCGATC ACGCGGTCCC GCTGAACGAG GTCGCGATCC GGGAGCTCAA GGGCACGCCG
ACGGCGCTAG ACCTTTACAC CTATCTTGCC TACCGTTTGC CGCGGATTGG GTCCGACAAG
GGCCAGGTGA TTTCGTGGGA CCAGCTCGCC AAACATCTCG GCAACGAGGC TGACAGCAAA
CGCTTTCGCC AAACCGTTCG TGAGACGATG CAGATCGTAT CGGCGGTGTA CCCGAATGCA
AACGTTGACC TATCGGGCCG GAAAGTAGTT CTACACCCGT CGCCAGCGCC GATGGAACGC
AAGCTCGTGG GACCCCACCT ACGGCTGATC GGCGCTGCTG CTGATGAAAC GGCACTGAGA
TCATCGGTCA AGGGCGGTCG CGAGCCTGCA GTAGCCGCTG CAAAGGACGC TGAACCTCTG
CTCGGATTCC CATCGGGGTC TCTCAGTTTT GGCACTCGCG AATCAGTGTT CCGAGAGATC
GGCCTCACAA AGGGAAAACC GTGGTCCGTC GATACGATGG CCGATGCGTT CCGCGCCGGA
TTTCCCGATA TCAAGAGACC GCGTTCAGAA AAGGAGTGGC TTCGCGTCTG GGACGCTTTC
GTCGTACGGT ACGCTGAGCG GAGGGCGAGT CGGCCGGACG ACTGA
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| Protein sequence | MNGDQHKPLG HQYALAMLTG GEEGVRKLAT SAGTQLTIDA FLRVQDEEPV PAFLHSALCA
MSLPTKRPKD DTQPIVREDG KYALAINPRP VLQNIDGKSV MRSLGVPYGA YPRVALIYLL
SQAVMKQSRD VYLGRNFTEW MRRLGYQTVS YGPRGTANLM REQVDRLLAC EWQIRWDGTE
ADGNAFAVRD VKISNEYAGS LDKNGSFARE IRMSEAFYSH LIDHAVPLNE VAIRELKGTP
TALDLYTYLA YRLPRIGSDK GQVISWDQLA KHLGNEADSK RFRQTVRETM QIVSAVYPNA
NVDLSGRKVV LHPSPAPMER KLVGPHLRLI GAAADETALR SSVKGGREPA VAAAKDAEPL
LGFPSGSLSF GTRESVFREI GLTKGKPWSV DTMADAFRAG FPDIKRPRSE KEWLRVWDAF
VVRYAERRAS RPDD
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