Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4936 |
Symbol | |
ID | 5195931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 47526 |
End bp | 48422 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579374 |
Product | parB-like partition protein |
Protein accession | YP_001260322 |
Protein GI | 148550892 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.0153012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.946011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGT TCGACCAACG GGCCGAGGAA TTCGGGATGC TGGTAGGCGC GCACGAAAGT GCGCGCCGCG TCGAGGAACT GCCGCTCGAC TGGCTGACGC CCGATCCCGG CAATCCCCGC ACGCATTTCG ATGAAGCCGA GATGGCGGAG CTTGCGGCTT CGATCGAGGC GCGCGGCGTG CTGCAGCCGA TTATCGTCCG TCCCAAGAAT GGAGATGGCA AGCATGTCAT CCGGATGGGT GAGCGGCGTT ACCGCGCCTC GCTCGCAGCG GGGAAGAAAA CCATCCCCGC GATCGTGGTG GATGCGGGGG AGGGGGCCGA TGTCCTTGCC GACCAGATCG TCGAGAATGA CCAGCGCGCC AGCCTCTCGT CGCGCGAGCT CGCTTTGGGC GTCGAGCGCA TGCTGGCCGA TGGAAAGAAC CAGGCCGAGA TCGCCAAGGC GCTCGGCCGT TCGAAGCAGT TCGTCTCGCT CTACGCCGCT TATGGCGAGA TGGAGCCATA TCTGCGCGAC GCAATCGACA AGGCCCCGAT CCGGGTTCTG TACGATTTGC ACCGGGCTGC ACGAAAACAC CCGCTGGAGG TTCGCGACTT CGTCAGGGGA TTCGGCGAGC GGGGCGTGAC GCTTGCGGAA GGCACGAAGT TCGTCACCTC GCTCAAAGTG CCGGCTGAAA CAGGGGCGCC GTCTGCAAAG GCCGCGCCCG CCGCCGGGCC AGTCGAGCCA GTGCCTGGAA AGCGGGTGGG CAGGGCAGGG CGGTCATCGG CATCGTTACA GCCGAGCCCG TTCAAGGTCA TGGTTGGCAC CAGATCTGCC CGACTGGTGC TGCCCGATCG GGTCCGTGTC GTGTTCGATG ACGGTGACGA AGATGAGGTG GCATCATCCG ACCTGTCGTT CGATTGA
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Protein sequence | MGKFDQRAEE FGMLVGAHES ARRVEELPLD WLTPDPGNPR THFDEAEMAE LAASIEARGV LQPIIVRPKN GDGKHVIRMG ERRYRASLAA GKKTIPAIVV DAGEGADVLA DQIVENDQRA SLSSRELALG VERMLADGKN QAEIAKALGR SKQFVSLYAA YGEMEPYLRD AIDKAPIRVL YDLHRAARKH PLEVRDFVRG FGERGVTLAE GTKFVTSLKV PAETGAPSAK AAPAAGPVEP VPGKRVGRAG RSSASLQPSP FKVMVGTRSA RLVLPDRVRV VFDDGDEDEV ASSDLSFD
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