Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4923 |
Symbol | |
ID | 5196013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 35547 |
End bp | 36572 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640579362 |
Product | 4-hydroxy-2-ketovalerate aldolase |
Protein accession | YP_001260310 |
Protein GI | 148550880 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 0.854205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCG ATCCCAACAT GCAAAAGCTC TATATTCAAG ACGTCACCCT GCGCGACGGG ATGCATGCGA TCCGCCACCA GTATGGCCTC GATCATGTCC AGGCGATCGC CCGCGCACTC GACCGGGCCA AGGTCGATGC GATCGAGGTC GCGCATGGCG ACGGCCTGCA GGGCTCAAGC TTCAACTACG GCTTTGGTGC CTACACCGAC TGGGACTGGA TCGGCGCAGT TGCCGAAGTG CTCGAGCATT CGGTGCTCAC CACACTGCTG CTGCCGGGTA TCGGCACGGT CCACGATCTG AAGCACGCTT ACGAGATGGG TGTGCGCTCG GTCCGCATCG CGACGCACTG CACCGAGGCC GATGTCAGCA AGCAGCATAT CGAGGCCGCC CGCAATCTCG GCATGGATGT CTCGGGCTTC CTGATGATGA GCCACATGAT CGATCCCGAG GCGCTTGCTG AGCAAGCGCT GCTGATGGAA AGCTACGGGG CACACTGCGT CTACGTCACC GACAGCGGCG GGGCGATGAA CATGGATGAA TACGCCGCGC GTTGCCAGGC CTATGACCGG GTTCTCAAAC CCGAGACCCA GCGTGGTGTT CACGCTCACC ATAACCTCAG CTTGGGCGTC GCCAACTCGA TCGTGGCGGT GCAGAACGGT GTGGTCCGGG TCGATGCCAG CCTGGCCGGG ATGGGCGCTG GCGCGGGCAA TGCCCCGCTC GAAGTGTTTA TCGCCGCTGC CGACCGGATG GGCTGGAACC ACGGTTGCGA CTTGTTCGCA CTGATGGATG CGGCCGAGGA TCTTGTCCGT CCGTTGCAGG ACCGCCCCGT CCGTGTCGAC CGCGAGACGC TGACGCTGGG CTATGCCGGG GTCTATTCCA GCTTCCTGCG TCACGCGGAA AAGGCCAGTA GCGATTACGG TGTGGATACC CGTTCGATCC TGGCCGAAGT GGGCCGCCGC AAGATGGTTG GCGGACAGGA AGACATGATC GTCGATATCG CGCTGGACAT GGTAAAAGCG CGATGA
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Protein sequence | MSFDPNMQKL YIQDVTLRDG MHAIRHQYGL DHVQAIARAL DRAKVDAIEV AHGDGLQGSS FNYGFGAYTD WDWIGAVAEV LEHSVLTTLL LPGIGTVHDL KHAYEMGVRS VRIATHCTEA DVSKQHIEAA RNLGMDVSGF LMMSHMIDPE ALAEQALLME SYGAHCVYVT DSGGAMNMDE YAARCQAYDR VLKPETQRGV HAHHNLSLGV ANSIVAVQNG VVRVDASLAG MGAGAGNAPL EVFIAAADRM GWNHGCDLFA LMDAAEDLVR PLQDRPVRVD RETLTLGYAG VYSSFLRHAE KASSDYGVDT RSILAEVGRR KMVGGQEDMI VDIALDMVKA R
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