| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4859 |
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| Symbol | |
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| ID | 5200402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5352766 |
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| End bp | 5355435 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584416 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_001265334 |
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| Protein GI | 148557752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AATATGTCTA TCGGTTCGGC GGCGGCGTTT CCGACGGCGG CAAGGGTGAC
AGGAACCTCC TCGGCGGAAA GGGTGCGAAC CTCGCCGAAA TGGCCTCGAT CGGCCTGCCG
GTTCCGCCCG GCTTCACCAT CTCGACCGAG ATGTGCCAGC GTTATTATGA CGAGGGCCAG
CAATTCCCCG ACAGCCTGAG GAGCGAGGTC GCCAACGGCA TCGCCCATAT CGAGGCGATC
ACCAACAAGA AGTTCGGCGT CGCCGCCGAT CCGCTGCTGG TGTCGGTCCG TTCGGGCGCG
CGCGCCTCGA TGCCGGGGAT GATGGACACC GTCCTCAACC TCGGCCTCAA CGACGAGACC
GTGGTCGGCC TCGCCGCCGT GTCGGGTGAC GCCCGCTTCG CGTGGGACAG CTATCGCCGC
TTCATCCAGA TGTATTCGGA CGTCGTCCTG GAGCTCGATC ACAGCGCCTT CGAGGAAGCG
CTGGAGATCG CCAAGGAGGA CAAGGGCTAC AATCTCGATA CCGAGATGAC CGCCGACGAC
TGGCAGGCGC TCGTCAAGCG CTACCAGGAA CTGGTCGCGG AGATGTGGGA CAAGCCCTTC
CCGCAGGACG TGCACGAGCA GCTCTGGGGC GCGATCGGCG CGGTGTTCGG CTCCTGGCAG
TCGGAGCGCG CGAAGGTCTA TCGCCGCCTC AACGACATTC CGGGCGACTG GGGCACCGCG
GTCAACGTCC AGGCGATGGT GTTCGGCAAC ATGGGCGACA CCTCGGCCAC CGGCGTCGCC
TTCACCCGCG ATCCGTCGAA GGGCGACCGC GCTTATTATG GCGAGTTCCT GATCAACGCG
CAGGGCGAGG ACGTCGTCGC CGGCATCCGC ACCCCGCAAT ATCTGACCAG GATCGCGCGC
GAGACCGCCG GCGCCAAGCC CGCCTCGATG GAGGAGGCGC TGCCCGAGGT CTATGGCGAA
TTGGCCAAGG TGTTCGACCT GCTGGAGACC CATTATCGGG ACATGCAGGA CATCGAGTTC
ACGGTGCAGC AGGGCAAGCT CTGGATGCTC CAGACCCGTT CGGGCAAGCG CACCGCCAAG
GCCGCGCTCA AGATCGCGGT CGACATGGCG AACGAGGGGC TGATCACCCG CGAGGAGGCC
GTCGCCCGCG TCGATCCGGC CGCGCTCGAC CAGCTTCTCC ACCCGACCCT CGACCCGCAG
GCGCCGCGTG ACGTGATCGC CAAGGGCCTG CCGGCCTCGC CGGGCGCTGC CTCGGGCCTC
GTCGTGTTCG ATGCCGAGAC CGCCGAGAAG CGCGCCGAAC TGGGCGATGC GGTGATCCTG
GTCCGCGTCG AGACCAGCCC CGAGGACATC CACGGCATGC ATGCCGCCAA GGGCATCCTG
ACGGCGCGCG GCGGCATGAC CAGCCACGCG GCGGTGGTCG CGCGCGGCAT GGGCCGTCCC
TGCGTGTCGG GCGTCGGCAC GCTCGCGATC GACGCCAAGG CGAAGGTCTT CCGCGTCGCC
GGCCGCGAGG TGCGCGAGGG CGACGTCATC ACCATCGACG GCGCGACCGG CGAGGTGATG
CTGGGCGCCG TCCCGACCGT CCAGCCCGAG CTGGCGGGCG ACTTCGGCAC GTTGATGGGC
TGGGCCGACC AGGTCCGCCG CCTCAAGGTC CGCGCCAATG CCGAGACGCC GCTCGACTGC
AAGACCGCGC GCATCTTCGG CGCCGAGGGC GTCGGCCTGT GCCGCACCGA GCATATGTTC
TTCGACGCCG CCCGCATCAC CGCGGTTCGC CAGATGATCC TGGCCGAGGA CGAGAAGGGT
CGTCGCGTCG CGCTCGACAA GCTGCTGCCC GAGCAGCGCG CCGACTTCAC CGAGATTTTC
GAGATCATGG CCGGCCTGCC GGTCACGATC CGTCTGCTCG ATCCGCCGCT CCACGAATTC
CTGCCGCATG AGGAGGAGGA GTTCGCCGAG GTGGCGACGG CGACCGGCAT CGGCATCGAG
GCGCTCAAGC GCCGCGCCGC CGAGCTGCAC GAGTTCAACC CGATGCTCGG CCATCGCGGC
TGCCGCCTCG GCGTGACCTA TCCCGAAATC TACGAGATGC AGGCGCGCGC GATCTTCGAA
GCGGCCTGCG ACGTCGCCGC GAAGTCGGGA AGCGCGCCGA TCCCCGAGGT GATGGTCCCG
CTGGTCGCGA CCCGCCGCGA GCTGGAGCTG ATGAAGGCGG TGATCGACAA GGCCGCCAAG
GCGGTGTTCG CCGAGAAGGG CCGCACGCTC GACTATCTGG TCGGCACGAT GATCGAGCTG
CCGCGCGCCG CGCTCAAGGC GGGCGAGATC GCCGAGGTCG GCGAGTTCTT CTCGTTCGGC
ACCAACGACC TGACCCAGAC GACGCTGGGC GTGTCGCGCG ACGACGCCGG CCGCTTCCTG
ACCACCTATG TCGACAAGGG CATCTATCCC AAGGACCCGT TCGTCAGCCT CGACGTCGAC
GGCGTCGGCG AGCTGATCGA GTTGGCGGCC GAGCGCGGCC GCAAGACCCG TGGCGACATC
AAGCTCGGCA TCTGCGGCGA GCATGGCGGC GACCCGGCCT CGATCGCCTT CTGCGAGGCG
ACCGGGCTCG ATTACGTCTC GGCCTCGCCG TACCGCGTGC CGATCGCCCG CCTCGCCGCG
GCGCAGGCCG CGCTCAAGGC GAAGAGGTAG
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| Protein sequence | MTTQYVYRFG GGVSDGGKGD RNLLGGKGAN LAEMASIGLP VPPGFTISTE MCQRYYDEGQ
QFPDSLRSEV ANGIAHIEAI TNKKFGVAAD PLLVSVRSGA RASMPGMMDT VLNLGLNDET
VVGLAAVSGD ARFAWDSYRR FIQMYSDVVL ELDHSAFEEA LEIAKEDKGY NLDTEMTADD
WQALVKRYQE LVAEMWDKPF PQDVHEQLWG AIGAVFGSWQ SERAKVYRRL NDIPGDWGTA
VNVQAMVFGN MGDTSATGVA FTRDPSKGDR AYYGEFLINA QGEDVVAGIR TPQYLTRIAR
ETAGAKPASM EEALPEVYGE LAKVFDLLET HYRDMQDIEF TVQQGKLWML QTRSGKRTAK
AALKIAVDMA NEGLITREEA VARVDPAALD QLLHPTLDPQ APRDVIAKGL PASPGAASGL
VVFDAETAEK RAELGDAVIL VRVETSPEDI HGMHAAKGIL TARGGMTSHA AVVARGMGRP
CVSGVGTLAI DAKAKVFRVA GREVREGDVI TIDGATGEVM LGAVPTVQPE LAGDFGTLMG
WADQVRRLKV RANAETPLDC KTARIFGAEG VGLCRTEHMF FDAARITAVR QMILAEDEKG
RRVALDKLLP EQRADFTEIF EIMAGLPVTI RLLDPPLHEF LPHEEEEFAE VATATGIGIE
ALKRRAAELH EFNPMLGHRG CRLGVTYPEI YEMQARAIFE AACDVAAKSG SAPIPEVMVP
LVATRRELEL MKAVIDKAAK AVFAEKGRTL DYLVGTMIEL PRAALKAGEI AEVGEFFSFG
TNDLTQTTLG VSRDDAGRFL TTYVDKGIYP KDPFVSLDVD GVGELIELAA ERGRKTRGDI
KLGICGEHGG DPASIAFCEA TGLDYVSASP YRVPIARLAA AQAALKAKR
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