| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4858 |
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| Symbol | |
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| ID | 5198858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5350676 |
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| End bp | 5352709 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584415 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_001265333 |
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| Protein GI | 148557751 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATT TCCTGCTCGA ACTCCTCTCC GAGGAAATCC CCGCGCGGAT GCAGGAGAAG
GCGTCGGCCG ACCTCGCCCG CCTGTTCACC GAGGAACTGG CCAAGGCCGG GCTGACGCCC
GACGGCATCA CCTCTTACGT CACCCCGCGC CGCCTCGCGC TGATCGCGCA CGGCCTGCCG
GTCGAGACGG CGGCGGTGTC GGAGGAGCTG AAGGGGCCCA AGGCCTCCGC GCCGCCGCAG
GCGCTCGAAG GCTTCCTGCG CAAGACCGGC CTGACCCGCG AACAACTCGT CGAGCGCGAC
GGCACGCTGT TCGCGGTGAT CGAGAAGCCG GGCCGCGCGA CCGCCGCGGT GCTGGCCGAG
GCGATCCCCG CGATCGTCCG CAACTTCCCC TGGCCCAAGT CGATGCGCTG GGGCACCGCC
TCGCTGTCGA CCGCCGCGCT GCGCTGGGTC CGCCCGCTCC AGGGCATCGT CGCCCTGCTC
GGCGAGGAGA TCGTGCCGTT CGAGATCGAC GGCGTGGCGA GCGGCGCGGC GACGGTCGGC
CACCGCTTCC ACCATCCCGG CATCATCACG ATCGGCAGCG CCGCCGACTA TGCCGGGAAG
CTGCGCGCCT GCCACGTCAT CGTCGACCAT GCCGAGCGCC GCGACATCAT CCGCGCCCGC
GCCGCCGAGC TGGCGGCGGG GCAGGGCATG ACGGTCATCC CCGACGAGGG GCTGGTCGCC
GAGAATGCCG GCCTCACCGA ATGGCCGGTG CCGCTGCTCG GCCATTTCGA CCCGGCCTTC
CTGGAGGTGC CGCGCGAGGT GATCCAGCTC ACCCTGCGCA CCAACCAGAA ATATTTCGTG
CTCAACGACG CCGAGGGCAA GCTCGCCCCG GCCTTCATCT GCACCGCCAA CATCAGCGCC
AGGGACGGCG GCGCGGCGAT CGTCGCGGGC AACGGCAAGG TGCTGGCGGC GCGGCTGTCG
GACGCGAAAT TCTTCTGGGA ACAGGACCTC AAGGTTCCGC TCGACGATTA TCTCCCCAAG
CTGGAGGCGA TGCTCTTCTA CGAGGGCATG GGCACGCTGC GCGAGAAGGC CGATCGCATC
GCGGCGCTCG CGGCCTGGAT CGCGCAAGCC TATTTCCCCG AGCGCGATCC GGAGACGGCG
CGCCGCGCGG GCCTGCTCGC CAAGGCCGAT CTCGCCACCG CGATGGTCGG CGAGTTCCCC
GAGCTGCAGG GCGTGATGGG CGGCTATTAT GCCGAGAAAC GCGGCGAGAA GCCGGGCACC
GTCTCCGCGC TCAAGCAGCA ATATGTCGCG GCGGTCGAGG GTTGCATCCC CGCCTGCGTC
GCGTTGGCCG ACCGCATCGA CACGCTGGTC GCCTTCTTCG CGCGCGGGAT CAAGCCGACC
GGGTCGAAGG ACCCGTTCGC GCTGCGCCGC GCCGCGTTGC AGACGATCCA GACGATCCTC
GTCAACGGCA CCCGCATGAA CCTGCTGGCG ACGATCGAGC AGGCCAAGAC GGGGCTCGGC
GCGAGCGGGC TCGACAGCGC CGAGCTGCTC GACTTCTTCG CCGACCGCCT GAAGGTCCAG
CAGCGCGAGG CGGGCGTCCG CCACGACCTG ATCGACGCGG TGTTCGCGCT GGGCGGGGAG
GATGATCTCG TCCGCCTGCT GGCGCGGGTG AAGGCGCTCC AGGCGTTCGT CGAGACCGAG
GACGGCGCGA ATCTGCTCGC CGGCTACAAG CGCGCGGCCA ACATCCTCAG GAAGGAGGGC
GGGGTGCCCG AAGGCGCCTC GGCGACCCCG GATTACCAAC CGGAAGTCGC GGAATCGGCA
CTGATCGCCG CGCTCGACGC GGCCGAGCCG AAGGCCGCGG CGGCGGTCGA AGCGGAGGAT
TTCGCGGGCG CGATGGCCGC TCTCGCCACG TTGCGCGGGC CGATCGACGC CTTCTTCGAT
CAGGTCATCG TCAACGATTC TTCGTCATCG AAAAGAAACA CTCGGCTCGC GCTGCTTGAA
AAAATCCGTG TTGCGGTGCA CAACGTCGCC GACTTCTCGA ACATCGAGGG CTGA
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| Protein sequence | MADFLLELLS EEIPARMQEK ASADLARLFT EELAKAGLTP DGITSYVTPR RLALIAHGLP
VETAAVSEEL KGPKASAPPQ ALEGFLRKTG LTREQLVERD GTLFAVIEKP GRATAAVLAE
AIPAIVRNFP WPKSMRWGTA SLSTAALRWV RPLQGIVALL GEEIVPFEID GVASGAATVG
HRFHHPGIIT IGSAADYAGK LRACHVIVDH AERRDIIRAR AAELAAGQGM TVIPDEGLVA
ENAGLTEWPV PLLGHFDPAF LEVPREVIQL TLRTNQKYFV LNDAEGKLAP AFICTANISA
RDGGAAIVAG NGKVLAARLS DAKFFWEQDL KVPLDDYLPK LEAMLFYEGM GTLREKADRI
AALAAWIAQA YFPERDPETA RRAGLLAKAD LATAMVGEFP ELQGVMGGYY AEKRGEKPGT
VSALKQQYVA AVEGCIPACV ALADRIDTLV AFFARGIKPT GSKDPFALRR AALQTIQTIL
VNGTRMNLLA TIEQAKTGLG ASGLDSAELL DFFADRLKVQ QREAGVRHDL IDAVFALGGE
DDLVRLLARV KALQAFVETE DGANLLAGYK RAANILRKEG GVPEGASATP DYQPEVAESA
LIAALDAAEP KAAAAVEAED FAGAMAALAT LRGPIDAFFD QVIVNDSSSS KRNTRLALLE
KIRVAVHNVA DFSNIEG
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