| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4854 |
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| Symbol | |
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| ID | 5198854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5346728 |
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| End bp | 5347423 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584411 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001265329 |
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| Protein GI | 148557747 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAT TGCTGATCGA GGACGATCCC ACGACCGCCA AGAGCATCGA GCTGATGCTC
GGCGCCGAAG GCTTCAACGT CTATACCACC GACCTCGGCG AGGAAGGCCT CGATCTGGGC
AAGCTCTATG ATTACGACAT CATCGCGCTC GACCTGAACC TGCCCGACAT GCACGGCTAC
GACGTGCTCA AGAAGCTGCG CGGCGCCAAG GTGCAGACCC CGGTGATGAT CCTGTCGGGC
ATCGGCGAGA TGGACTCGAA GGTCCGCGCG CTGGGCTTCG GCGCCGACGA TTACGTCACC
AAGCCCTTCC ACCGCGAGGA GCTGGTCGCC CGCATCCACG CGATCGTCCG CCGCTCGAAG
GGCCACAGCC AGTCGGTGAT CCGCACCGGC AAGCTGGCGG TGAACCTGGA CGCCAAGACC
GTCGAGGTCG ACGGCGCCCG CGTCCACCTG ACCGGCAAGG AATATGCGAT GCTCGAGCTG
CTGTCGCTGC GCAAGGGCAC GACGCTGACC AAGGAGATGT TCCTCAACCA TCTCTATGGC
GGGATGGACG AGCCCGAGCT GAAGATCATC GACGTCTTCA TCTGCAAGCT CCGCAAGAAG
CTGAGCCTCG CCTGTAGCGG CGACAATTAT ATCGAGACCG TGTGGGGCCG CGGCTATGTG
CTGCGCGATC CCGAAGAGGG CCAGGTCGCC GCCTGA
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| Protein sequence | MRVLLIEDDP TTAKSIELML GAEGFNVYTT DLGEEGLDLG KLYDYDIIAL DLNLPDMHGY
DVLKKLRGAK VQTPVMILSG IGEMDSKVRA LGFGADDYVT KPFHREELVA RIHAIVRRSK
GHSQSVIRTG KLAVNLDAKT VEVDGARVHL TGKEYAMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LSLACSGDNY IETVWGRGYV LRDPEEGQVA A
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