| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4820 |
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| Symbol | |
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| ID | 5198017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5308880 |
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| End bp | 5310343 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584377 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001265295 |
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| Protein GI | 148557713 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.53889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.786094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGACC TTTTCCTCAT CGGTTTCCTG GTTGCGATCC TGCTGGCGGG GTTCCGGCGG
CCGTTCCTGT TCGTCTGCGC CTATGTCTAT GTCGACATCG TCTCGCCGCA GCGCATCTCC
TATTATCTGC TGAGTTCGGT CCCGGTCTCG CTGATCGTGT TCATCGCCGC CTTCCTGGGC
TGGGCGATCA ACGACGACAA GTCGCTCAGC AAGCCGACGC CGCGGCAGGT GCTGCTGATC
CTGCTGCTGC TCTATTGCGG CTATACGACG CTGACCGCCG ACTATCCCGA CGCCGCGCTG
GAGAAATGGG ACTGGGTGTG GAAGGCGCTG GTCTTCTCGA TCTTCATGCC GATGACGCTC
TACACGCGCA TCCGCATCGA AGGCGTGCTG CTGTTCATGC TGCTCTGCCT GTCGTCGATC
GCGGTGGTGG GCGGCGCCAA GACGCTGGCC GGCGGCGGCG GCTACGGCAC CCTCAACCTG
ATGGTCGCCA ACAACAGCGG CATGTACGAG AGCAGCACCA TATCGGCCTT CGCGATCTGC
TCGATCCCGC TGATCCTCTA CATGGCGAAA TATTCGACGA TCGTGCGGCC GACGATCTTC
TCGCGGCTCT ACTGGTATGC GCTCGCCTTC GCCTGCCTGC TGATCCCGAT CGGCACGCAG
ACGCGCACCG GCCTGCTGTG CATCGTGCTG GCGGGCGTGC TCGAACTGCG CGCGACGAAG
CGGCGCTTCC TCTATATCGG CATCATCGCG GCGATCGCCA CGGCGGGCAT CCCCTTCCTG
CCGAAGACCT ATACCCAGCG GATGGACACG ATCCAGGGCT ATAAGGGCGA CGCATCGGCC
TCGACCCGCC TCGCCGTGTG GAAATGGACG CTCGACTATT CGAAGTCCCA TCCGTTCGGC
GGCGGCTTCG AGGCCTATCG CGGCAACAAG CTGACCATCG ACATGAGCTA CAGGACCGCC
GATGGGACGG TGGTCAGCGT GGTCGGCTAC GACGCCGGCC GATCCTTCCA CAACGCCTAT
TTCGAGATGC TGGGCGAACA GGGCTATCCG GGGCTCGCGC TGTTCCTGGC GGTCCACCTG
ATCGGCATCT TCCGCATGGA GGTGATCCGA CGAAGTTACC TGAAGGAGCA AGGCGCCAAC
GCCTGGGTGT CGCCGCTCGC GGCGGCGCTC CAGCATGCCC ATCTCATCTA CATGCTGGGC
TCCTCCTTCG TCGGCATCGC CTTCCAGCCC TATATCTACT ACATCATCGC GGTCGAGATC
GGCTTCGACC GCTATGTCCA GATCCATGTG AAGCGACGGG TCTGGAATCC CTTCCGCAAG
CGCAGGCGCG ACGTGGAAGC GGAGGAGGAG GCGAGCGAAG CCGAGGCGCT TCCCGAGCCC
GAACCGGAGC CGGAGCGCCC GCTGTCGGCC GCGGCGGAAC GCCGCCGCGC CCAGCCTCGT
TGGGGCAATG TGAACGGCAA ATGA
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| Protein sequence | MRDLFLIGFL VAILLAGFRR PFLFVCAYVY VDIVSPQRIS YYLLSSVPVS LIVFIAAFLG
WAINDDKSLS KPTPRQVLLI LLLLYCGYTT LTADYPDAAL EKWDWVWKAL VFSIFMPMTL
YTRIRIEGVL LFMLLCLSSI AVVGGAKTLA GGGGYGTLNL MVANNSGMYE SSTISAFAIC
SIPLILYMAK YSTIVRPTIF SRLYWYALAF ACLLIPIGTQ TRTGLLCIVL AGVLELRATK
RRFLYIGIIA AIATAGIPFL PKTYTQRMDT IQGYKGDASA STRLAVWKWT LDYSKSHPFG
GGFEAYRGNK LTIDMSYRTA DGTVVSVVGY DAGRSFHNAY FEMLGEQGYP GLALFLAVHL
IGIFRMEVIR RSYLKEQGAN AWVSPLAAAL QHAHLIYMLG SSFVGIAFQP YIYYIIAVEI
GFDRYVQIHV KRRVWNPFRK RRRDVEAEEE ASEAEALPEP EPEPERPLSA AAERRRAQPR
WGNVNGK
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