| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4740 |
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| Symbol | |
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| ID | 5198775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5214908 |
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| End bp | 5217172 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640584296 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001265215 |
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| Protein GI | 148557633 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT CCAGCCGCGC GCCATCGCCG CCCACACGTC TCTACGCTGA GTGGCTCGCG
GTCGCGATCG TCGCGACGCT GCTGATCTTC GCGCTGGTGA CGGGCCGGCT GACCGAGCGG
CTCGACCATA TCGTCTATGA CAATGTCCTG ACCGCATCGG GCCGCCCGCC GCCCGACGAC
ATATTGATCG TCGCGATCGA CAATCGCAGC CTCCAGGCGA TCGGTCGCTG GCCCTGGCCG
CGCGCGATCC ACGCCCAGGC GCTCGACCGG CTCGCCGAGG CGCGGCCCCG CGCGATCGGC
TATGACGTGC TGTTCGTCGA GCCGAGCGCC GACGACGCCC TGCTCGCCGC GGCGGTGCGG
CGGACGCCGA CCTATCTGCC GATGGTGATC GACGTGCCCG GCACCGACGG CGCGCCCTAT
GACATCGCCC TGCCGGCCGG CCCGCTCGAG GACGCCGCCG CCGGCATCGC CCAGGTCAAC
CTGCATTTCG GCGACGACCG GGTGATCCGC ACCGCCTATC TGGAGGAAGG CGGCGGCGGC
CGGTCGTGGC TCCAGCTCTC GGCGCTGATG GCCGGGCTGA AACCCGAAGG CGGCGCCGGG
CGCGAGCGCA ACGGGCTGTG GCAGGCGCGG CCGGTGCTGA TCCCCTATGG CGGGGCCGCC
GGCCATGTCA GCACCATCTC CTTCGTCGAC CTGCTCGACG GGCGCGTCCC CGCGGAGCTG
ATCAGGGGCC GCCAGGTGCT GATCGGCGCC ACCGCCGACG GCATGGGCGA CAGCTATCCG
ACGCCGACCT CGGGGGCGAC GAGCCAGATG GCGGGGGTCG AGATCCAGGC GCAGCTCCTC
GATGCGCTGC TGCGGGGCGA GGCGATCACC CCCGCCCCCC GCTCCTGGAC ATTGTGGCTG
GCGCTGTGCG CGCTGTGGGC AATGCTGGTC GGCTTCCTGC GGCTGTCCCC GCGCGCCAAC
GCCAATCTCT CCCTGGCGCT GGTCGTCGCG CTGCCGCTGC TCAGCTTCCT GCTGTTCCGC
TTCGGCCATG TCTGGCTGCC GCCGTCGGCG GCGCTGATCG GCCTGCTGTT CGTCTATCCG
CTCTGGGGCT GGCGCCGGTT GCAGGCGATC AGCAGCTACA TGACCGGCGA GCTGCGCCAG
CTCGATGCCG AGAACGACGC CTTCCCGCGC CGGCACCGGG TGCGCAGCAT CCGCGAGGTG
ACGTTGCAGG CGGGGCTGCT CGGCCAGGCG ATCGACCGGC TGCGCGACCT TCGCCGCTTC
CTGTCGGACG CGATCGGCCG CCTGCCCGAC GCGCTGTTCG TCACCGGACT CGACGGCCGG
CTGGCCCTGA CCAACGCCGA AGGCCGCCGC CTCGCCCGCC GGCTCGGCGC GCCGAGCGAG
GTCGGCGCCG ACCTGCGCAT CCTGCTCGAC CGGTTCCGCG CGCCGGACGG CACCGCCTTC
TCCCCCTTCG CGGCGGACGC GCCGATCCGG GGCGGCACCG AGACCGCGAC GGAGGACGGC
GGCAGCTTCG ACATCCGCTA CGTCGCGCAG CGCGACGCCG CCAACGCGCG GGTCGGCTGG
ATCATCCGGA TCGTCGACGT CACCGCCCTC AAGCAGGCCG AGCGCCATCG CGAGGAGGCG
CTCCAGCTGC TGAGCCACGA CATGCGCGCG CCGCAGTCGG CGATTCTCGC GCTGCTGCGC
GGGCCCGAGA CCGGCGTCCC CAAGGCGATG GCGGCGCGGA TCGAGGGCCT CGCCAACCGC
ACGCTCGAGC TGGCCGAGGA TTTCGTCCAG CTCGCCCGTG CCGAGGCCAA GCCGATGGAC
CGCGAGCCGC TCGACATGAA CGACCTCGCG ATCGACGCCG CCGACGCGCT ATGGCCGGTG
GCGAAGGCGC GCGCCATCAA GGTGGCGGTC GAGGGGACCG ACGATCCGCA CATGGTCGAC
GGCGACCGCC AGCTCCTCAC CCGCGCGATC CTCAACCTGA TCAGCAACGC GATCAAATAT
AGCGATCCCG GCATGCGCAT CCGCTGTTCG GTGAGCGAGG ACGACGGGCT GGTCCGCGTC
GCGGTCGCCG ACGAGGGCGT CGGCATGGAC GAGGATCAGC TCGCCAACCT CTTCGCGCGC
TTCCGGCAGG GGCCGCGCGA GGGCGTCGGC CTGGGGCTCA CCTTCGTCCG CACGGTCGTC
GCCCGCCATG ACGGCAAGAT CGATTGCACC AGCGAGCCCG GCAAGGGCAC GACCTTCACG
ATCACGCTGC GCAAGAGCGA CGCCGACCCC TATGCCGACG AATGA
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| Protein sequence | MALSSRAPSP PTRLYAEWLA VAIVATLLIF ALVTGRLTER LDHIVYDNVL TASGRPPPDD
ILIVAIDNRS LQAIGRWPWP RAIHAQALDR LAEARPRAIG YDVLFVEPSA DDALLAAAVR
RTPTYLPMVI DVPGTDGAPY DIALPAGPLE DAAAGIAQVN LHFGDDRVIR TAYLEEGGGG
RSWLQLSALM AGLKPEGGAG RERNGLWQAR PVLIPYGGAA GHVSTISFVD LLDGRVPAEL
IRGRQVLIGA TADGMGDSYP TPTSGATSQM AGVEIQAQLL DALLRGEAIT PAPRSWTLWL
ALCALWAMLV GFLRLSPRAN ANLSLALVVA LPLLSFLLFR FGHVWLPPSA ALIGLLFVYP
LWGWRRLQAI SSYMTGELRQ LDAENDAFPR RHRVRSIREV TLQAGLLGQA IDRLRDLRRF
LSDAIGRLPD ALFVTGLDGR LALTNAEGRR LARRLGAPSE VGADLRILLD RFRAPDGTAF
SPFAADAPIR GGTETATEDG GSFDIRYVAQ RDAANARVGW IIRIVDVTAL KQAERHREEA
LQLLSHDMRA PQSAILALLR GPETGVPKAM AARIEGLANR TLELAEDFVQ LARAEAKPMD
REPLDMNDLA IDAADALWPV AKARAIKVAV EGTDDPHMVD GDRQLLTRAI LNLISNAIKY
SDPGMRIRCS VSEDDGLVRV AVADEGVGMD EDQLANLFAR FRQGPREGVG LGLTFVRTVV
ARHDGKIDCT SEPGKGTTFT ITLRKSDADP YADE
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