| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4731 |
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| Symbol | |
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| ID | 5199110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5203073 |
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| End bp | 5204407 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584286 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001265206 |
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| Protein GI | 148557624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.911552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCTA GGACGCGGGC GGTATTTCGA GAAAGGGTAT CTATGTCGCA GCCGTTGAGG
GTCGCGCTCG CAGGTTTGGG AACGGTCGGC GCGGGCGTCG TCAAGCTCAT CGACGAGAAC
CGCGCGCTCA TCGAGCGCCG TGCCGGCCGC CCGATCGAGA TCGTCGCCGT TTCGGCGCGC
GACCGGTCGC GCGATCGCGG CGTCGATCTT TCGCGCTTCG CCTGGGTCGA CGACGCCACC
ACGCTGGCGG CGTCCGGCGA TGTCGACGTC GTGGTCGAGC TGGTCGGCGG GTCGGACGGC
CCGGCGCTGA CCCTGGCGCG CGACACGCTC GGCGCGGGCA AGCCCTTCGT CACCGCCAAC
AAGGCGATGA TCGCGCATCA CGGCCTCGAA CTGGCCGAGC TGGCCGAGCA GAAGGGCGTC
GCGCTCAAAT ATGAGGCGGC GGTCGCGGGC GGCATCCCGG TGATCAAGGG GCTGCGCGAG
GGCGCGGCCG CCAACGTGAT CAGCCATGTG TTCGGCATCC TCAACGGCAC CTGCAACTAT
ATCCTCACCG AAATGGAGGA GAAGGGCAGC GACTTCGCCG AGGTGCTCGC CGAGGCGCAG
CGGCTGGGCT ATGCCGAGGC CGACCCCAGC TTCGACATCG ACGGCATCGA CGCCGCGCAC
AAGCTGTCGA TCCTCTCCAG CCTCGCCTTC GGCACCGCGG TCGATTTCGA TTCGATCGAG
GTCACCGGCA TCCGCCACAT CATCGCCGCC GATATCGCCG AGGCCGCCGC GCTCGGCTTC
CGCGTCCGGC TGGTCGGCCA TGGCGAGGAG AGCGCCAAGG GGCTGTTCCA GCGCGTCCAT
CCCTGCTTGG TGCCGCTCAG CCATCCGCTC GCCCATGTCT CGGGATCGCT CAACGCGGTG
GTCGCGCACG GCAATTTCGT CGGCCGGCTG TTCTTCCAGG GGCGCGGCGC GGGCGAGGGG
CCGACCGCGT CGGCGGTGGT CGCCGACTTG ATCGACATCG CGCGCGGCGA GACCGGGCCC
GCCTTCGCCA TGCCGGTGGC GGCGCTCGCC AAGCCGGCGA CGGCGCCCGC CGGCGACCGG
CGCGGCCGCG CCTATCTGCG CTTCACCGTC GCCGATCGTC CGGGCGTGCT GGCCGAGATC
ACCGCGGCGA TGCGCGACGC CGGCGTCTCG ATCGAGAGCC TGATCCAGCG CGGCGTCGCC
GACGACGGCA ACGTCCTGAT CGCGATGGTG ACGCATGTCG GCCCCGAGCG CGCGGTCGCC
GATGCGCTCG ACCGGCTCGC CGGCTCGCAG AGCCTCGCCG GAACGCCCAT GTTGATGCAT
ATCCTCGACG AATAG
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| Protein sequence | MLPRTRAVFR ERVSMSQPLR VALAGLGTVG AGVVKLIDEN RALIERRAGR PIEIVAVSAR
DRSRDRGVDL SRFAWVDDAT TLAASGDVDV VVELVGGSDG PALTLARDTL GAGKPFVTAN
KAMIAHHGLE LAELAEQKGV ALKYEAAVAG GIPVIKGLRE GAAANVISHV FGILNGTCNY
ILTEMEEKGS DFAEVLAEAQ RLGYAEADPS FDIDGIDAAH KLSILSSLAF GTAVDFDSIE
VTGIRHIIAA DIAEAAALGF RVRLVGHGEE SAKGLFQRVH PCLVPLSHPL AHVSGSLNAV
VAHGNFVGRL FFQGRGAGEG PTASAVVADL IDIARGETGP AFAMPVAALA KPATAPAGDR
RGRAYLRFTV ADRPGVLAEI TAAMRDAGVS IESLIQRGVA DDGNVLIAMV THVGPERAVA
DALDRLAGSQ SLAGTPMLMH ILDE
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