| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4708 |
|---|
| Symbol | |
|---|
| ID | 5199092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5178957 |
|---|
| End bp | 5179787 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640584262 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001265183 |
|---|
| Protein GI | 148557601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGC TGATCGCCAT CGCGGCGGCG CTGCTGGCGT CGGCGGCGGC GCAGGCCGCG
CCGGTGCCGG GCACGGTCGA CAAGCTGTGG CGGCTCGACT GCGGCCGCTT CCACCTCAAC
CAGCCCAACC TCTTCTCGGA CACCCAGGCC TATACCGGCC AGACCCGCGA CCTGGTCGGC
AGCTGCTACC TGATCAAGGA CGGCGACGCC TATATGCTGT GGGACACCGG CGTGCCGGCG
GCCCTGCTCG GCGCCAAGCC CGATCCGACC CAGCCGATCG ACGCCCGGCT CGACCGGACG
ATCGTCGACC AGCTCGCCCA GATCGGCGTC AAGCCAGAGC AGATCGGCCT GATCGGCATC
AGCCATTATC ATTTCGACCA CACCGGACAG GCGGCGGACT TCCCCAAGGC GAAGCTCGTC
ATCGGCGCCG GCGACCTGAA GGCCGCGCGC GCCGACAAGG ACGGCATCGG CAAGCCGATC
GCGCCCTGGC TCGCCGACGG CGCCAAGGTC GAGGCGGTCG AGGGCGACAA GGACCTGTTC
GGCGACGGCA GCGTGGTGAT GATCAACTTT ACCGGCCACA CGCCGGGCCA TCACGGCCTG
CTGGTGCGGC TGCCCCGCAC GGGCGTCGTG CTGCTGTCGG GCGACGTCGC CCATTTCCAC
GAGAATCTCG ACAGCGACGG GGTGCCGACC TTCAACACCG ACCGCGCCGA TTCGCTGGCG
TCGATGGACC GTTTCCGCAA GCTCGGCGCC TCGCTCAAGG CGGTGTCGAT CATCCAGCAT
GATCCGCGCG ACGTCGCCAA GCTGCCCGCT TTCCCGCAAG GAGCCGATTG A
|
|---|
| Protein sequence | MKRLIAIAAA LLASAAAQAA PVPGTVDKLW RLDCGRFHLN QPNLFSDTQA YTGQTRDLVG
SCYLIKDGDA YMLWDTGVPA ALLGAKPDPT QPIDARLDRT IVDQLAQIGV KPEQIGLIGI
SHYHFDHTGQ AADFPKAKLV IGAGDLKAAR ADKDGIGKPI APWLADGAKV EAVEGDKDLF
GDGSVVMINF TGHTPGHHGL LVRLPRTGVV LLSGDVAHFH ENLDSDGVPT FNTDRADSLA
SMDRFRKLGA SLKAVSIIQH DPRDVAKLPA FPQGAD
|
|---|
| |