| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4670 |
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| Symbol | |
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| ID | 5198655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5137479 |
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| End bp | 5138915 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584224 |
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| Product | choline dehydrogenase-like flavoprotein |
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| Protein accession | YP_001265145 |
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| Protein GI | 148557563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0703924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.59002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGA TCGATCCCGC CACGCTCGCC GGCGAGCATT TCGACACCGT CGTCGTCGGA
TCGGGCTTCG GCGCGGCCTT CTTCGTCCAC AAGCTGCTCG AACGGCGGCC CGGCAGGATA
TTGATCGTCG AATGGGGCCG GCACCATCCG CACGACTGGC AGGTGGCGCA CGGCGCGAAC
AGCGCGCTGC CCGCCGACCG GACCTACCGA TCCGACAATC CCAAGCCCTG GCATTACACG
GTGGCGCTGG GCGGCGGCAC CAATTGCTGG TTCGGCCAGG CGCCGCGCTT CCACCCGTCC
GACTTCAAGC TGCGCAGCCG CTACGGCGTC GGCAACGACT GGCCGATCGA CTATGCCGAC
CTCGAACCCT ATTATGGCGA GGCCGAGGCG ATCATGGCGA TCTCGGGCGA TCCCGACATG
ACCGCGATCT TCCCGCGCTC GACCCCCTAT CCGCAGCCGC CGCACCACCT GACCACGCCC
GACCGGATCA TGAAGAAGGC GCAGCCCGAG GCGCATTTCG CGATGCCGAC CGCGCGGGCG
CGGGTGGCGA CCGAACAGCG TCCGGCCTGC TGCGCCTCCT TCACCTGCCA GCGCTGCCCG
GCCGACGCCA AGTTCACCGC GAACAACGGG CTGATGCCGA TGTTCGGCGA CGAACGCGTC
ACCGTCGCGC TGCGATCGAA GGCGCTCCGC TACGAAGGCG CCGGCAACAG CGTAAGCGCG
CTGGTCTTCG AACATGCCGG CAAGCCCTGT CGCGTGACGG GCGATCTGTT CGTGCTCGGC
GCCAACGCGA TCCAGAGCCC GGCGATCCTC CAGCGCTCGT CGATGGGCGG CGGACTGACG
GGCAAGGGGC TGCACGAAAG CCTCGGCACC CATGTCGAGG TGCTGCTCGA CGGCATGAAC
GGCTTCGACG GCAGCACCAT CACCACCGGG ATCAACTTCG GCCTCTACGA CGGCGACCAC
CGCGGCGAAC ATGGCGCCGC GCTGGTCTAT TTCGACAATC GCTGGACCCA CGGCCTGCGC
GCCGAGAAGG GGCGCTGGCG GCAGAGCCTG CCGCTGATGA TCGTGACCGA GGACCTGCTC
GAGGACCGCA ACCACGTCAC CGTCGACGGC AGGGGCGAGG CGGTGGTCAG CTTCGTCGCG
CCGTCCGACT ATGCCGAGCG CGGGCAGGCC GAGGCCTTCG CCAAACTGCC CCGGCTGCTC
GAACCGCTGC CGGTCGAGGA CATCGTCTTC CGATCGCGGC GGCCGACCGA GTCGCATCTG
CAGGGCACGC TGCGAATGGG CGAGGACCCG GCGACGTCGG TGATCGACGC GAAGATGATC
CACCATCGCT GGCGCAACCT GGTCGTGGTC GGCAGCTCGG CCTTCGCGAC CTGCTCCTGC
GCCAATCCCA GCCTCACGGT CGCCGCGCTG TCGCTGCGCG CGGCGGCGAT GGTCTGA
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| Protein sequence | MRPIDPATLA GEHFDTVVVG SGFGAAFFVH KLLERRPGRI LIVEWGRHHP HDWQVAHGAN
SALPADRTYR SDNPKPWHYT VALGGGTNCW FGQAPRFHPS DFKLRSRYGV GNDWPIDYAD
LEPYYGEAEA IMAISGDPDM TAIFPRSTPY PQPPHHLTTP DRIMKKAQPE AHFAMPTARA
RVATEQRPAC CASFTCQRCP ADAKFTANNG LMPMFGDERV TVALRSKALR YEGAGNSVSA
LVFEHAGKPC RVTGDLFVLG ANAIQSPAIL QRSSMGGGLT GKGLHESLGT HVEVLLDGMN
GFDGSTITTG INFGLYDGDH RGEHGAALVY FDNRWTHGLR AEKGRWRQSL PLMIVTEDLL
EDRNHVTVDG RGEAVVSFVA PSDYAERGQA EAFAKLPRLL EPLPVEDIVF RSRRPTESHL
QGTLRMGEDP ATSVIDAKMI HHRWRNLVVV GSSAFATCSC ANPSLTVAAL SLRAAAMV
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