| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4620 |
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| Symbol | |
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| ID | 5198486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5085254 |
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| End bp | 5086417 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584175 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001265096 |
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| Protein GI | 148557514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.518996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGC GGCCGGGGGA GGGGGCGATG GACAAGGGCA TGATCCGGCG GATTTTTCCG
ATCGTCGCCG GAACCTATAT CGCGATGATC CCCATGGAGG TCGCGCCCTT CGTGATCGGC
GCGGCCGTCG AGCGCGGCCT CTCGGCCGGG CAGGCGGGAT GGGTGGGCAC GGCCACCATC
GCCTTCGTCG CGATCGCGTC GATATGCGCT CCACCCCTGA TCGCGCGCCT GCGCTTCCGC
CAGGCCATGA TCGGCTTCGC CTGTATCGAG GCCGCCGGCT ATTGCGGCTT CGCGGCGGCA
CAGGGCTTCG CCCTGCTGCT GGCGATGGGC AGTCTTGCCG GCTGCGGGGC CGGCGGGTTG
CTCGCCGGCA TGGCGATCCG CATCGCGCGC ACCGACGATC CGGACAGGAC CTATGGCTAT
GTCTACGCGG CCACCGGCCT GGGGTTCGCG CTCCTGCTGT TCCTGTTCCC GATCATCGGC
GCGAAGTTCG GGACGGCGGC GATGTTCCTG TTCGCCGGCT TCATCGCGCT GGCGCTGAGC
TGTCTTCTCC GATCCCTGCC GGCGGGCTTC CTGCATGAGG AGGTCGAGGC GGGCCCTGCG
CAGCCGGTCG ACCGGTGGGG CGTGGCCCTG CTGGTCGCCG CGATGATCGT CGCTATGCCC
GTCTATGGCG GAACCTATGG CTTTTCCGAA AGGAAGGCCG TGGAAATCGG CCTGTCCTCG
CGCGATGCCG GGCTCGCGCT TTCCTGCGCC ATGCTAATGT CGATCATCGG CTCCTCGATC
GTCGCCCTGG TCGGCACGCA AAGGGGACGG CTGCTTCCCA TGGCCACCGT CCTCCTGCTC
GCCAGCCTCG CCTATCTCAC CGTGCTCGGG GCCCGGTCGG CGCCCGTCTA TGTCGCGGGC
ACCTTGATCT TCGGGCTGAT GCAGCTGGCC CTGACCTCCT ATTTCTTCGG ATTGGCCTCG
GCCCTGGACA GGAACGGGGG CGTCGCCGCG CGACTGCAGG GCTTCTCGCT CATTCCCTAT
GGGCTCGGCA CCGGGCTGTT CGGCAGCCTG GCCGACGGCG GCAGCCTGGC GCGCCTCGCC
GTGCCGGCCG CCGCCGCCAA TCTCGTCGCC CTGGCCATCG TCCTGCCGGT CCTCGTCAGG
CAGGACCGTG GCCGCCGCGC CTGA
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| Protein sequence | MEPRPGEGAM DKGMIRRIFP IVAGTYIAMI PMEVAPFVIG AAVERGLSAG QAGWVGTATI
AFVAIASICA PPLIARLRFR QAMIGFACIE AAGYCGFAAA QGFALLLAMG SLAGCGAGGL
LAGMAIRIAR TDDPDRTYGY VYAATGLGFA LLLFLFPIIG AKFGTAAMFL FAGFIALALS
CLLRSLPAGF LHEEVEAGPA QPVDRWGVAL LVAAMIVAMP VYGGTYGFSE RKAVEIGLSS
RDAGLALSCA MLMSIIGSSI VALVGTQRGR LLPMATVLLL ASLAYLTVLG ARSAPVYVAG
TLIFGLMQLA LTSYFFGLAS ALDRNGGVAA RLQGFSLIPY GLGTGLFGSL ADGGSLARLA
VPAAAANLVA LAIVLPVLVR QDRGRRA
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