| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4541 |
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| Symbol | |
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| ID | 5200284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4994573 |
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| End bp | 4995898 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584094 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001265017 |
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| Protein GI | 148557435 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4091] Predicted homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.10759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.775728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGG TCGACACGGC GCTGCGCCGC CGCGAGGAGG AAGGGCGGCC GATCCGCGTC
GGCATCGTCG GCGCCGGTTT CCAGGGCGCC GCGATCGTGC GGCAGATCAT GACGGTGACG
CCGGGCATGA CGGTGGCGGC GCTCGCCAAC CGGAACATCG CGCCGGCCGT CGCGGCGTTC
GAGGCGCTCG GGATCGCGCC GCGCCGCTGC GACTCCCGCC GCGCCGTCGA GGCCGCGATC
GCCGCCGGCG AACCGGCCGT CACCGAGGAT GCCATCGGCC TGGCCGAGGC CGACGGCATC
GACGTCGTCG TCGAGGTGAC CGGATCGATC GAGCATGCCG CCGCGGTGAT CGTCGCCGCG
ATCCGCGCGG GCAAGCACGT CGTCCAGATG AACGCCGAGG TCGACGGCAC GGTCGGCCCG
ATCCTGAAGC GCAAGGCCGA CGCGGCGGGG CTGGTCTACA GCTTCTCCGA CGGCGACCAG
CCGGGCGTGC AGATGAACCT GTTCCGCTTC GTCGCCGGGC TCGGGGTGAA GCCGGTGCTG
TGCGGCAACA TCAAGGGGCT GCACGACCCG AAGCGCAACC CGACCACCCA GCAGGCCTTT
GCCGAGAAAT GGGGGCAGAA ACCGGCGATG GTCGCGTCCT TCGCGGACGG CACCAAGATT
TCCTACGAAC AAGCGATCGT CGCCAACGGC ACGGGTTTCT CCGTCGCCCG TCGGGGGATG
ATCGGGCCAG ACTTCTCCGG CGGGGATCCT ACAGCCCCCC TGGTCCCGCT GGAGGAGACC
GTTTCGGCCT TCGCGGACGC GCTCGACGGC GCGTCCGCGG GCCTGGTCGA TTATGTGGTC
GGCGCCCGGC CGGGGCCCGG CGTGTTCGTG CTGGGAACGC AGGACGATCC CCGGCAGCGG
CATTTCCTGA ACCTCTACAA GCTGGGGACG GGCCCCTATT ATTGCTTCTC CACGCCCTAT
CATCTCTGCC ATTTCGAGGT GCCGACCTCG ATCGCGCGGG CGGCGCTGTT CGGCGACGCG
GTGCTCGCGC CGCTGGGCGC GCCGCGCGTC GGCGTGATCG CGGTCGCCAA GAAGGCGCTC
CGGCCGGGTG ACGTGATCGG GGAGTTCGGC GGCTTCGAGG CCTATGGCGT CGCCGAGAAT
GCCGACGTCA TCGACCGTGA GCGACTGCTG CCGCTCGGCC TCGCGCTCGG TTGCACGCTG
GTGCGGCCGG TGGCCGAGGA CCAGCCGATC GGCCGCGACG ACGTCTTCGT GCCGGCCGGG
CGGCTGATCG ACCGGCTATA TGCCGAGCAG CAGGAACATT TCGCCGGCAA GCGGCAGGCG
GCCTGA
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| Protein sequence | MILVDTALRR REEEGRPIRV GIVGAGFQGA AIVRQIMTVT PGMTVAALAN RNIAPAVAAF
EALGIAPRRC DSRRAVEAAI AAGEPAVTED AIGLAEADGI DVVVEVTGSI EHAAAVIVAA
IRAGKHVVQM NAEVDGTVGP ILKRKADAAG LVYSFSDGDQ PGVQMNLFRF VAGLGVKPVL
CGNIKGLHDP KRNPTTQQAF AEKWGQKPAM VASFADGTKI SYEQAIVANG TGFSVARRGM
IGPDFSGGDP TAPLVPLEET VSAFADALDG ASAGLVDYVV GARPGPGVFV LGTQDDPRQR
HFLNLYKLGT GPYYCFSTPY HLCHFEVPTS IARAALFGDA VLAPLGAPRV GVIAVAKKAL
RPGDVIGEFG GFEAYGVAEN ADVIDRERLL PLGLALGCTL VRPVAEDQPI GRDDVFVPAG
RLIDRLYAEQ QEHFAGKRQA A
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