Gene Swit_4522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4522 
Symbol 
ID5196213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4970163 
End bp4971197 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID640584075 
Productacyltransferase 3 
Protein accessionYP_001264998 
Protein GI148557416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3594] Fucose 4-O-acetylase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.236282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC AGGCCCCCGC TCCCGGCGTC CCCCTGCCCG CCGCCGCGCG GATGCCGAAG 
GCGGTCGACC GGGTCCAGGT GACGCGCGGG CTCGCCTGCC TGCTGCTGGT TCTGTTCCAC
GTCGTCGGCG GCAAGGCCGA CGACGGGCTG CGCATCGCCG ACGCCAGCAT CGGGCGCCAG
ATCCTCGACG TGCTGCTCTA TGTCCGGATG CCGCTGTTCG CCTTCATCTC CGGTTATGTC
TATACATTGA AGCCGCTCGA TCCGGCGCGG CCCGCCCCCT TCCTGCAGGG CAAGCTGCGG
CGGCTGGCGC TGCCGCTGCT GACCGCGACG ACGATCTTCT ACCTGGCCGC GCTGGCCCGC
GCGCCGCAGC CCCCGGCCGA GGCGGCGCTG GGGCTGCTCC ACGCCTATGT CTTCTCCTAC
GGGATATACT GGTTCCTGCA GGCGATGCTG CTGATCTTCC TGCTGCTGCC GCTGCTCGAG
CGCTTCCTGC TCCATTCGCC GGTCGGCTGC GCGGCGGCGG TGCTGGCGGG GTTCCTGCTG
ACCGTGCCCG CCGAGCCCAT CGACCTGCTG TCGATCAACG GCGCGGCCTT CCTCGCGCCC
TTCTTCTTCA TCGGCATCGC CGCGCGCCGC TTCATCGGGC CGCTGAGCCC CGGCTGGACG
CTGGCGCTGC TGGCGATCCT GGTCGTCGCC TTCGCACTGC ACATCCACAA TGTCGCGACG
CTGCCGCCGC ACATGGGCGC GCGGCGGGGC ACCTGGCTGT CGCTGCTGAT CGGCGGGATC
ACGCCGCTGC TGCTGGTCGC GCATGTGCCG CGCGTCGCGC TGCTCGCGCG GATCGGCCAT
GCGTCCTTCG CGATCTTCCT GTTCCACATC TTCTTCATCG TCGCGATGCG GATGCTGCTG
CGGGCGATCG GGATCGAGGA TTTCGCGATC CACCTGCTCG CCGGCCTCGC CGCGGCGATC
GCCGGGCCGA TGCTGCTGGA GACGCTGCTG GCGAAGGGGA AGGCGACGCG CCGCCTGTTC
CTCGGCCTGC GCTGA
 
Protein sequence
MSSQAPAPGV PLPAAARMPK AVDRVQVTRG LACLLLVLFH VVGGKADDGL RIADASIGRQ 
ILDVLLYVRM PLFAFISGYV YTLKPLDPAR PAPFLQGKLR RLALPLLTAT TIFYLAALAR
APQPPAEAAL GLLHAYVFSY GIYWFLQAML LIFLLLPLLE RFLLHSPVGC AAAVLAGFLL
TVPAEPIDLL SINGAAFLAP FFFIGIAARR FIGPLSPGWT LALLAILVVA FALHIHNVAT
LPPHMGARRG TWLSLLIGGI TPLLLVAHVP RVALLARIGH ASFAIFLFHI FFIVAMRMLL
RAIGIEDFAI HLLAGLAAAI AGPMLLETLL AKGKATRRLF LGLR