Gene Swit_4515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4515 
Symbol 
ID5199314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4962146 
End bp4962646 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID640584068 
Producthypothetical protein 
Protein accessionYP_001264991 
Protein GI148557409 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0560805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAT GGTTGCTTGG CTTTGCGGCG CTGGCGGGGG CGATGGCGGC GCCCGCTGCG 
GCACAGGACC TGATCGGCCT GACCCGCGCG ATCGGCGTCG CCGAACGCAG CCTCTCGGCG
CGCGCGATCG AGGGCGAGCT GGAAACCAGC GGCGGCCGGC TGGTCTATGA GATCGACCTG
GTGCGCGGAC AGGTGTTGCA CCGCGCGCTG ATCGATGCGC GGACCGGCAA GCTCGTCTCG
GCGGTCAAGC CCCGCGCGGA GAACTGGCTG CGCGGCTGGT TCGACAAGGA GCGGTTGCGC
AGCGGCGGCA AGGCCACCCC GCTGAGCGAG CATCTCGTCG CGCTCGAACG GCACAGCCGC
GGCGAGGTCA AGGAGGTCGA GTTCGAGATC CACAGGGGAC GCGGCGTCTA CGAGATCGAG
CTGGCGACCG CCGCCGGCAT CGGCAAGGTC CGGCTCGACG CCTCGACCGG GCAGCGGATC
GCGCTGGCCC ATGACGATTG A
 
Protein sequence
MLRWLLGFAA LAGAMAAPAA AQDLIGLTRA IGVAERSLSA RAIEGELETS GGRLVYEIDL 
VRGQVLHRAL IDARTGKLVS AVKPRAENWL RGWFDKERLR SGGKATPLSE HLVALERHSR
GEVKEVEFEI HRGRGVYEIE LATAAGIGKV RLDASTGQRI ALAHDD