Gene Swit_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4489 
Symbol 
ID5200000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4932945 
End bp4933385 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID640584042 
ProductMarR family transcriptional regulator 
Protein accessionYP_001264965 
Protein GI148557383 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.364343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC CGGTCCCGTT CGACACCACG CTGCACGTCC GCGATCATTG CCTGTGTCTC 
CATGCCCAGC GCGCGGCGCG GGTGCTCGCG CGGCGGTTCG ACGAGGCGCT GCGCCCGGTC
GGACTGACCA ACCAGCAATT CTCTCTGCTG ATGTCGCTCA ACCGGCCGCA GGCGCCGACG
ATCGGCGTCG TTGCCGAGCT GCTCGGCATG GACCGGACCA CCCTGACCGC GGCGCTCAAG
CCGCTCGAAC GGCGCGGGCT GGCGACGATC GTCGTCGACC CGGCCGATCG CCGCGGCCGC
AACATCCTGC TGACCCCGGA CGGGGAGGCG CTGCTGGCCG AGGCGATGCC GATCTGGCGC
GATACCCATG CAGCGGTCGA GCGGTCGATG GTCGGCGTCG ACGTCGATCG GCTGCGGCGC
GATCTCGGCA CCATCGTCTG A
 
Protein sequence
MSKPVPFDTT LHVRDHCLCL HAQRAARVLA RRFDEALRPV GLTNQQFSLL MSLNRPQAPT 
IGVVAELLGM DRTTLTAALK PLERRGLATI VVDPADRRGR NILLTPDGEA LLAEAMPIWR
DTHAAVERSM VGVDVDRLRR DLGTIV